Analysis of interatomic Contacts of Structural Units in PDB entry:
2C17


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2C17 entry

There is 1 chain in PDB entry 2C17 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 1GLU 454
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 2C17. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
A
A
1 13Right-handed alpha
Helix 2
B
A
31 40Right-handed alpha
Helix 3
B'
A
50 61Right-handed alpha
Helix 4
C
A
71 83Right-handed alpha
Helix 5
D
A
95 113Right-handed alpha
Helix 6
E
A
123 137Right-handed alpha
Helix 7
F
A
146 164Right-handed alpha
Helix 8
G
A
178 206Right-handed alpha
Helix 9
H
A
214 219Right-handed alpha
Helix 10
I
A
242 273Right-handed alpha
Helix 11
J
A
274 289Right-handed alpha
Helix 12
J'
A
295 302Right-handed alpha
Helix 13
K
A
303 317Right-handed alpha
Helix 14
K'
A
349 353Right-handed alpha
Helix 15
L
A
397 414Right-handed alpha
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There are 4 sheets in PDB entry 2C17. Click on sheet of interest to get list of strands forming it: 1, 2, 3, 4,

There are 5 strands in 1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 21first strand
Strand 2
A
23 29first strand
Strand 3
A
342 348first strand
Strand 4
A
321 327first strand
Strand 5
A
44 48first strand
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There are 2 strands in 2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
329 333first strand
Strand 2
A
336 340first strand
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There are 3 strands in 3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
117 120first strand
Strand 2
A
442 449first strand
Strand 3
A
415 419first strand
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There are 2 strands in 4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
431 434first strand
Strand 2
A
436 440first strand
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il