Analysis of interatomic Contacts of Structural Units in PDB entry:
2C2V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2C2V entry

There are 12 chains in PDB entry 2C2V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 ALA 3ILE 156
C
 THR 33ASN 174
E
 ALA 6ILE 156
F
 VAL 36ASN 174
H
 ALA 6ILE 156
I
 VAL 36ASN 174
K
 ALA 3ILE 156
L
 VAL 36ASN 174
S
 ASP 227VAL 301
T
 ASP 227TYR 304
U
 ASP 227GLY 299
V
 PRO 229GLY 299
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 49 helices in PDB entry 2C2V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
B
9 22Right-handed alpha
Helix 2
2
B
92 97Right-handed alpha
Helix 3
3
B
104 116Right-handed alpha
Helix 4
4
B
127 152Right-handed alpha
Helix 5
5
C
39 53Right-handed alpha
Helix 6
6
C
132 137Right-handed alpha
Helix 7
7
C
143 155Right-handed alpha
Helix 8
8
E
9 22Right-handed alpha
Helix 9
9
E
92 96Right-handed 310
Helix 10
10
E
104 118Right-handed alpha
Helix 11
11
E
127 136Right-handed alpha
Helix 12
12
E
136 152Right-handed alpha
Helix 13
13
F
39 54Right-handed alpha
Helix 14
14
F
128 131Right-handed 310
Helix 15
15
F
132 137Right-handed alpha
Helix 16
16
F
143 156Right-handed alpha
Helix 17
17
H
9 22Right-handed alpha
Helix 18
18
H
92 97Right-handed alpha
Helix 19
19
H
104 118Right-handed alpha
Helix 20
20
H
127 136Right-handed alpha
Helix 21
21
H
138 153Right-handed alpha
Helix 22
22
I
39 54Right-handed alpha
Helix 23
23
I
132 137Right-handed alpha
Helix 24
24
I
143 157Right-handed alpha
Helix 25
25
I
157 162Right-handed alpha
Helix 26
26
K
9 22Right-handed alpha
Helix 27
27
K
92 97Right-handed alpha
Helix 28
28
K
104 118Right-handed alpha
Helix 29
29
K
127 131Right-handed 310
Helix 30
30
K
136 153Right-handed alpha
Helix 31
31
L
39 54Right-handed alpha
Helix 32
32
L
128 131Right-handed 310
Helix 33
33
L
132 137Right-handed alpha
Helix 34
34
L
143 155Right-handed alpha
Helix 35
35
L
157 162Right-handed alpha
Helix 36
36
S
229 232Right-handed 310
Helix 37
37
S
255 265Right-handed alpha
Helix 38
38
S
277 281Right-handed 310
Helix 39
39
S
284 299Right-handed alpha
Helix 40
40
T
229 232Right-handed 310
Helix 41
41
T
255 265Right-handed alpha
Helix 42
42
T
284 297Right-handed alpha
Helix 43
43
U
229 232Right-handed 310
Helix 44
44
U
254 263Right-handed alpha
Helix 45
45
U
277 281Right-handed 310
Helix 46
46
U
284 298Right-handed alpha
Helix 47
47
V
254 264Right-handed alpha
Helix 48
48
V
277 281Right-handed 310
Helix 49
49
V
284 296Right-handed alpha
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There are 11 sheets in PDB entry 2C2V. Click on sheet of interest to get list of strands forming it: BA, CA, EA, FA, HA, IA, KA, LA, SA, TA, UA,

There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
27 31first strand
Strand 2
B
38 44anti-parallel
Strand 3
B
55 61anti-parallel
Strand 4
B
72 75anti-parallel
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There are 4 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
60 64first strand
Strand 2
C
74 80anti-parallel
Strand 3
C
91 97anti-parallel
Strand 4
C
108 111anti-parallel
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There are 4 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
27 32first strand
Strand 2
E
35 44anti-parallel
Strand 3
E
55 61anti-parallel
Strand 4
E
72 75anti-parallel
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There are 4 strands in FA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
60 64first strand
Strand 2
F
74 80anti-parallel
Strand 3
F
91 97anti-parallel
Strand 4
F
108 111anti-parallel
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There are 4 strands in HA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
28 32first strand
Strand 2
H
35 44anti-parallel
Strand 3
H
55 61anti-parallel
Strand 4
H
72 75anti-parallel
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There are 4 strands in IA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
61 64first strand
Strand 2
I
74 80anti-parallel
Strand 3
I
91 97anti-parallel
Strand 4
I
108 111anti-parallel
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There are 4 strands in KA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
27 32first strand
Strand 2
K
35 44anti-parallel
Strand 3
K
55 61anti-parallel
Strand 4
K
72 75anti-parallel
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There are 4 strands in LA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
62 64first strand
Strand 2
L
74 79anti-parallel
Strand 3
L
92 97anti-parallel
Strand 4
L
108 111anti-parallel
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There are 3 strands in SA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
S
252 254first strand
Strand 2
S
244 246anti-parallel
Strand 3
S
282 283anti-parallel
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There are 3 strands in TA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
T
252 254first strand
Strand 2
T
244 246anti-parallel
Strand 3
T
282 283anti-parallel
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There are 2 strands in UA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
U
245 246first strand
Strand 2
U
282 283anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il