Analysis of interatomic Contacts of Structural Units in PDB entry:
2C47


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2C47 entry

There are 8 chains in PDB entry 2C47 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 44PRO 110
A
 GLY 112ILE 338
B
 PRO 44PRO 110
B
 GLY 112ILE 338
C
 PHE 46PRO 110
C
 GLY 112PRO 337
D
 MET 42PRO 110
D
 GLY 112ILE 338
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 2C47. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
85 96Right-handed alpha
Helix 2
2
A
125 133Right-handed alpha
Helix 3
3
A
138 159Right-handed alpha
Helix 4
4
A
167 169Right-handed 310
Helix 5
5
A
220 225Right-handed alpha
Helix 6
6
A
230 248Right-handed alpha
Helix 7
7
A
259 273Right-handed alpha
Helix 8
8
A
275 280Right-handed alpha
Helix 9
9
A
284 296Right-handed alpha
Helix 10
10
A
304 319Right-handed alpha
Helix 11
11
B
85 96Right-handed alpha
Helix 12
12
B
125 133Right-handed alpha
Helix 13
13
B
138 159Right-handed alpha
Helix 14
14
B
167 169Right-handed 310
Helix 15
15
B
220 225Right-handed alpha
Helix 16
16
B
230 248Right-handed alpha
Helix 17
17
B
259 273Right-handed alpha
Helix 18
18
B
275 280Right-handed alpha
Helix 19
19
B
284 296Right-handed alpha
Helix 20
20
B
304 319Right-handed alpha
Helix 21
21
C
85 96Right-handed alpha
Helix 22
22
C
125 133Right-handed alpha
Helix 23
23
C
138 159Right-handed alpha
Helix 24
24
C
167 169Right-handed 310
Helix 25
25
C
220 225Right-handed alpha
Helix 26
26
C
230 248Right-handed alpha
Helix 27
27
C
259 273Right-handed alpha
Helix 28
28
C
275 280Right-handed alpha
Helix 29
29
C
284 296Right-handed alpha
Helix 30
30
C
304 319Right-handed alpha
Helix 31
31
D
42 44Right-handed 310
Helix 32
32
D
85 96Right-handed alpha
Helix 33
33
D
125 133Right-handed alpha
Helix 34
34
D
138 159Right-handed alpha
Helix 35
35
D
167 169Right-handed 310
Helix 36
36
D
220 225Right-handed alpha
Helix 37
37
D
230 248Right-handed alpha
Helix 38
38
D
259 273Right-handed alpha
Helix 39
39
D
275 280Right-handed alpha
Helix 40
40
D
284 296Right-handed alpha
Helix 41
41
D
304 319Right-handed alpha
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There are 12 sheets in PDB entry 2C47. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB, BC, CA, CB, CC, A, DB, C,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 51first strand
Strand 2
A
60 65anti-parallel
Strand 3
A
71 78anti-parallel
Strand 4
A
114 120anti-parallel
Strand 5
A
105 111anti-parallel
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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
161 162first strand
Strand 2
A
193 194anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
171 173first strand
Strand 2
A
184 186anti-parallel
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There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
46 51first strand
Strand 2
B
59 65anti-parallel
Strand 3
B
71 78anti-parallel
Strand 4
B
114 120anti-parallel
Strand 5
B
105 111anti-parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
161 162first strand
Strand 2
B
193 194anti-parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
171 173first strand
Strand 2
B
184 186anti-parallel
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There are 5 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
47 51first strand
Strand 2
C
60 64anti-parallel
Strand 3
C
71 78anti-parallel
Strand 4
C
114 120anti-parallel
Strand 5
C
105 111anti-parallel
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There are 2 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
161 162first strand
Strand 2
C
193 194anti-parallel
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There are 2 strands in CC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
171 173first strand
Strand 2
C
184 186anti-parallel
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There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
46 51first strand
Strand 2
D
60 65anti-parallel
Strand 3
D
71 78anti-parallel
Strand 4
D
114 120anti-parallel
Strand 5
D
105 111anti-parallel
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There are 2 strands in DB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
161 162first strand
Strand 2
D
193 194anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
171 173first strand
Strand 2
D
184 186anti-parallel
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