Analysis of interatomic Contacts of Structural Units in PDB entry:
2C6N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2C6N entry

There are 2 chains in PDB entry 2C6N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 1ASP 612
B
 ASP 2ILE 611
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 55 helices in PDB entry 2C6N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 6Right-handed 310
Helix 2
2
A
13 15Right-handed 310
Helix 3
3
A
16 45Right-handed alpha
Helix 4
4
A
47 77Right-handed alpha
Helix 5
5
A
85 96Right-handed alpha
Helix 6
6
A
104 125Right-handed alpha
Helix 7
7
A
141 150Right-handed alpha
Helix 8
8
A
152 187Right-handed alpha
Helix 9
9
A
193 199Right-handed alpha
Helix 10
10
A
206 238Right-handed alpha
Helix 11
11
A
264 269Right-handed alpha
Helix 12
12
A
281 287Right-handed alpha
Helix 13
13
A
289 304Right-handed alpha
Helix 14
14
A
310 316Right-handed alpha
Helix 15
15
A
352 373Right-handed alpha
Helix 16
16
A
384 408Right-handed alpha
Helix 17
17
A
417 433Right-handed alpha
Helix 18
18
A
434 451Right-handed alpha
Helix 19
19
A
455 457Right-handed 310
Helix 20
20
A
458 472Right-handed alpha
Helix 21
21
A
485 489Right-handed 310
Helix 22
22
A
498 520Right-handed alpha
Helix 23
23
A
524 528Right-handed 310
Helix 24
24
A
533 545Right-handed alpha
Helix 25
25
A
551 561Right-handed alpha
Helix 26
26
A
567 588Right-handed alpha
Helix 27
27
B
14 45Right-handed alpha
Helix 28
28
B
48 77Right-handed alpha
Helix 29
29
B
87 96Right-handed alpha
Helix 30
30
B
98 103Right-handed 310
Helix 31
31
B
104 123Right-handed alpha
Helix 32
32
B
141 150Right-handed alpha
Helix 33
33
B
152 169Right-handed alpha
Helix 34
34
B
171 188Right-handed alpha
Helix 35
35
B
193 200Right-handed alpha
Helix 36
36
B
201 203Right-handed 310
Helix 37
37
B
206 238Right-handed alpha
Helix 38
38
B
261 268Right-handed 310
Helix 39
39
B
283 287Right-handed 310
Helix 40
40
B
289 304Right-handed alpha
Helix 41
41
B
310 316Right-handed alpha
Helix 42
42
B
352 372Right-handed alpha
Helix 43
43
B
376 380Right-handed 310
Helix 44
44
B
384 401Right-handed alpha
Helix 45
45
B
401 408Right-handed alpha
Helix 46
46
B
418 433Right-handed alpha
Helix 47
47
B
434 451Right-handed alpha
Helix 48
48
B
455 459Right-handed 310
Helix 49
49
B
460 470Right-handed alpha
Helix 50
50
B
484 489Right-handed 310
Helix 51
51
B
498 519Right-handed alpha
Helix 52
52
B
524 528Right-handed 310
Helix 53
53
B
533 545Right-handed alpha
Helix 54
54
B
551 560Right-handed alpha
Helix 55
55
B
567 588Right-handed alpha
Back to top of page

There are 6 sheets in PDB entry 2C6N. Click on sheet of interest to get list of strands forming it: AA, AB, AC, BA, BB, BC,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
126 127first strand
Strand 2
A
137 138anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
248 249first strand
Strand 2
A
473 474parallel
Back to list of sheets
Back to top of page

There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
333 336first strand
Strand 2
A
343 346anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
126 128first strand
Strand 2
B
136 138anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
248 249first strand
Strand 2
B
473 474parallel
Back to list of sheets
Back to top of page

There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
333 336first strand
Strand 2
B
343 346anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il