Analysis of interatomic Contacts of Structural Units in PDB entry:
2C6P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2C6P entry

There is 1 chain in PDB entry 2C6P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 57ALA 750
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 2C6P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
57 65Right-handed alpha
Helix 2
2
A
66 78Right-handed alpha
Helix 3
3
A
86 104Right-handed alpha
Helix 4
4
A
181 191Right-handed alpha
Helix 5
5
A
209 220Right-handed alpha
Helix 6
6
A
230 235Right-handed alpha
Helix 7
7
A
282 286Right-handed 310
Helix 8
8
A
298 308Right-handed alpha
Helix 9
9
A
316 320Right-handed 310
Helix 10
10
A
388 408Right-handed alpha
Helix 11
11
A
428 438Right-handed alpha
Helix 12
12
A
438 445Right-handed alpha
Helix 13
13
A
470 480Right-handed alpha
Helix 14
14
A
492 501Right-handed alpha
Helix 15
15
A
521 527Right-handed alpha
Helix 16
16
A
558 566Right-handed alpha
Helix 17
17
A
570 590Right-handed alpha
Helix 18
18
A
597 616Right-handed alpha
Helix 19
19
A
618 626Right-handed alpha
Helix 20
20
A
629 652Right-handed alpha
Helix 21
21
A
657 675Right-handed alpha
Helix 22
22
A
705 713Right-handed alpha
Helix 23
23
A
714 718Right-handed 310
Helix 24
24
A
720 744Right-handed alpha
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There are 4 sheets in PDB entry 2C6P. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
107 119first strand
Strand 2
A
349 362anti-parallel
Strand 3
A
414 421anti-parallel
Strand 4
A
367 377parallel
Strand 5
A
446 451parallel
Strand 6
A
532 538parallel
Strand 7
A
461 466anti-parallel
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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
137 140first strand
Strand 2
A
127 131anti-parallel
Strand 3
A
343 345anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
162 163first strand
Strand 2
A
256 257parallel
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There are 3 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
203 204first strand
Strand 2
A
225 228parallel
Strand 3
A
294 297parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il