Analysis of interatomic Contacts of Structural Units in PDB entry:
2C6W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2C6W entry

There are 2 chains in PDB entry 2C6W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 51LEU 66
B
 ASN 267ASN 650
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 2C6W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
B
269 271Right-handed 310
Helix 2
2
B
272 288Right-handed alpha
Helix 3
3
B
303 316Right-handed alpha
Helix 4
4
B
368 371Right-handed 310
Helix 5
5
B
372 377Right-handed alpha
Helix 6
6
B
377 384Right-handed alpha
Helix 7
7
B
421 427Right-handed alpha
Helix 8
8
B
430 441Right-handed alpha
Helix 9
9
B
441 452Right-handed alpha
Helix 10
10
B
460 465Right-handed 310
Helix 11
11
B
479 492Right-handed alpha
Helix 12
12
B
524 540Right-handed alpha
Helix 13
13
B
544 548Right-handed 310
Helix 14
14
B
567 572Right-handed alpha
Helix 15
15
B
607 611Right-handed 310
Helix 16
16
B
612 627Right-handed alpha
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There are 5 sheets in PDB entry 2C6W. Click on sheet of interest to get list of strands forming it: AA, BA, BB, BC, BD,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 65first strand
Strand 2
A
53 56anti-parallel
Strand 3
B
296 300parallel
Strand 4
B
502 507anti-parallel
Strand 5
B
512 514anti-parallel
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There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
341 345first strand
Strand 2
B
328 335anti-parallel
Strand 3
B
591 598anti-parallel
Strand 4
B
582 587anti-parallel
Strand 5
B
558 560anti-parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
393 396first strand
Strand 2
B
417 420anti-parallel
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There are 2 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
495 496first strand
Strand 2
B
520 521anti-parallel
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There are 2 strands in BD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
640 643first strand
Strand 2
B
646 649anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il