Analysis of interatomic Contacts of Structural Units in PDB entry:
2C71


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2C71 entry

There is 1 chain in PDB entry 2C71 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 480LEU 684
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 2C71. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
491 506Right-handed alpha
Helix 2
2
A
514 518Right-handed 310
Helix 3
3
A
519 532Right-handed alpha
Helix 4
4
A
550 570Right-handed alpha
Helix 5
5
A
578 582Right-handed 310
Helix 6
6
A
584 591Right-handed alpha
Helix 7
7
A
609 621Right-handed alpha
Helix 8
8
A
638 653Right-handed alpha
Helix 9
9
A
659 668Right-handed alpha
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There are 3 sheets in PDB entry 2C71. Click on sheet of interest to get list of strands forming it: AA, AB, AC,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
535 538first strand
Strand 2
A
510 513parallel
Strand 3
A
481 487parallel
Strand 4
A
656 657parallel
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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
535 538first strand
Strand 2
A
510 513parallel
Strand 3
A
481 487parallel
Strand 4
A
626 630parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
575 576first strand
Strand 2
A
594 595parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il