Analysis of interatomic Contacts of Structural Units in PDB entry:
2C7N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2C7N entry

There are 12 chains in PDB entry 2C7N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 18GLN 73
B
 MET 1ARG 74
C
 LEU 17GLN 73
D
 MET 1ARG 74
E
 LEU 17GLU 65
F
 MET 1ARG 74
G
 LEU 17SER 71
H
 MET 1LEU 73
I
 LEU 17SER 74
J
 MET 1ARG 72
K
 LEU 17GLU 65
L
 MET 1ARG 74
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 2C7N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
28 32Right-handed 310
Helix 2
2
A
35 71Right-handed alpha
Helix 3
3
B
22 35Right-handed alpha
Helix 4
4
B
37 39Right-handed 310
Helix 5
5
B
56 60Right-handed 310
Helix 6
6
C
28 32Right-handed 310
Helix 7
7
C
35 70Right-handed alpha
Helix 8
8
D
22 35Right-handed alpha
Helix 9
9
D
37 39Right-handed 310
Helix 10
10
D
56 60Right-handed 310
Helix 11
11
E
28 32Right-handed 310
Helix 12
12
E
35 64Right-handed alpha
Helix 13
13
F
22 35Right-handed alpha
Helix 14
14
F
37 39Right-handed 310
Helix 15
15
F
56 60Right-handed 310
Helix 16
16
G
28 32Right-handed 310
Helix 17
17
G
35 70Right-handed alpha
Helix 18
18
H
22 34Right-handed alpha
Helix 19
19
H
37 39Right-handed 310
Helix 20
20
H
56 60Right-handed 310
Helix 21
21
I
28 32Right-handed 310
Helix 22
22
I
35 74Right-handed alpha
Helix 23
23
J
22 35Right-handed alpha
Helix 24
24
J
37 41Right-handed 310
Helix 25
25
J
56 60Right-handed 310
Helix 26
26
K
35 64Right-handed alpha
Helix 27
27
L
22 35Right-handed alpha
Helix 28
28
L
37 39Right-handed 310
Helix 29
29
L
56 60Right-handed 310
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There are 6 sheets in PDB entry 2C7N. Click on sheet of interest to get list of strands forming it: BA, A, FA, HA, JA, LA,

There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
12 16first strand
Strand 2
B
2 7anti-parallel
Strand 3
B
66 71parallel
Strand 4
B
41 45anti-parallel
Strand 5
B
48 49anti-parallel
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There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
12 16first strand
Strand 2
D
2 7anti-parallel
Strand 3
D
66 71parallel
Strand 4
D
41 45anti-parallel
Strand 5
D
48 49anti-parallel
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There are 5 strands in FA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
12 16first strand
Strand 2
F
2 7anti-parallel
Strand 3
F
66 71parallel
Strand 4
F
41 45anti-parallel
Strand 5
F
48 49anti-parallel
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There are 5 strands in HA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
12 16first strand
Strand 2
H
2 6anti-parallel
Strand 3
H
66 71parallel
Strand 4
H
41 45anti-parallel
Strand 5
H
48 49anti-parallel
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There are 5 strands in JA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
12 16first strand
Strand 2
J
2 6anti-parallel
Strand 3
J
66 70parallel
Strand 4
J
42 45anti-parallel
Strand 5
J
48 49anti-parallel
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There are 5 strands in LA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
12 16first strand
Strand 2
L
2 6anti-parallel
Strand 3
L
66 71parallel
Strand 4
L
41 45anti-parallel
Strand 5
L
48 49anti-parallel
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