Analysis of interatomic Contacts of Structural Units in PDB entry:
2C7S


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2C7S entry

There is 1 chain in PDB entry 2C7S (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 865PHE 1155
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 12 helices in PDB entry 2C7S. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
872 881Right-handed alpha
Helix 2
2
A
887 894Right-handed alpha
Helix 3
3
A
903 908Right-handed alpha
Helix 4
4
A
909 915Right-handed 310
Helix 5
5
A
923 926Right-handed 310
Helix 6
6
A
936 941Right-handed 310
Helix 7
7
A
963 965Right-handed 310
Helix 8
8
A
966 978Right-handed alpha
Helix 9
9
A
1058 1072Right-handed alpha
Helix 10
10
A
1087 1107Right-handed alpha
Helix 11
11
A
1110 1122Right-handed alpha
Helix 12
12
A
1128 1146Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 2C7S. Click on sheet of interest to get list of strands forming it: AA, AB, AC,

There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
868 869first strand
Strand 2
A
1108 1109anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
944 949first strand
Strand 2
A
952 959anti-parallel
Strand 3
A
1079 1082parallel
Strand 4
A
981 984parallel
Strand 5
A
1039 1046parallel
Strand 6
A
1023 1032anti-parallel
Strand 7
A
1010 1019anti-parallel
Strand 8
A
1004 1007anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
989 990first strand
Strand 2
A
993 994anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il