Analysis of interatomic Contacts of Structural Units in PDB entry:
2C7X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2C7X entry

There is 1 chain in PDB entry 2C7X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 11ARG 407
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 22 helices in PDB entry 2C7X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
21 27Right-handed alpha
Helix 2
2
A
28 39Right-handed alpha
Helix 3
3
A
57 67Right-handed alpha
Helix 4
4
A
73 77Right-handed 310
Helix 5
5
A
82 89Right-handed alpha
Helix 6
6
A
91 95Right-handed 310
Helix 7
7
A
98 106Right-handed alpha
Helix 8
8
A
107 111Right-handed 310
Helix 9
9
A
112 118Right-handed alpha
Helix 10
10
A
119 135Right-handed alpha
Helix 11
11
A
144 148Right-handed alpha
Helix 12
12
A
150 162Right-handed alpha
Helix 13
13
A
164 167Right-handed 310
Helix 14
14
A
168 180Right-handed alpha
Helix 15
15
A
183 206Right-handed alpha
Helix 16
16
A
212 224Right-handed alpha
Helix 17
17
A
229 261Right-handed alpha
Helix 18
18
A
262 272Right-handed alpha
Helix 19
19
A
275 288Right-handed alpha
Helix 20
20
A
318 323Right-handed alpha
Helix 21
21
A
356 375Right-handed alpha
Helix 22
22
A
383 387Right-handed 310
Back to top of page

There are 4 sheets in PDB entry 2C7X. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 16first strand
Strand 2
A
41 45parallel
Strand 3
A
51 55anti-parallel
Strand 4
A
315 317parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 71first strand
Strand 2
A
297 298anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
141 143first strand
Strand 2
A
402 404anti-parallel
Strand 3
A
379 380anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
302 304first strand
Strand 2
A
307 309anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il