Analysis of interatomic Contacts of Structural Units in PDB entry:
2C7Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2C7Z entry

There is 1 chain in PDB entry 2C7Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 39GLY 441
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 15 helices in PDB entry 2C7Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
75 91Right-handed alpha
Helix 2
2
A
93 97Right-handed 310
Helix 3
3
A
110 123Right-handed alpha
Helix 4
4
A
141 154Right-handed alpha
Helix 5
5
A
184 208Right-handed alpha
Helix 6
6
A
210 232Right-handed alpha
Helix 7
7
A
269 274Right-handed alpha
Helix 8
8
A
306 312Right-handed alpha
Helix 9
9
A
335 348Right-handed alpha
Helix 10
10
A
351 355Right-handed 310
Helix 11
11
A
364 375Right-handed alpha
Helix 12
12
A
378 381Right-handed 310
Helix 13
13
A
387 392Right-handed alpha
Helix 14
14
A
394 396Right-handed 310
Helix 15
15
A
397 414Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 2C7Z. Click on sheet of interest to get list of strands forming it: AA, AB, AC,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
42 47first strand
Strand 2
A
318 327anti-parallel
Strand 3
A
52 59anti-parallel
Strand 4
A
295 305anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
42 47first strand
Strand 2
A
318 327anti-parallel
Strand 3
A
430 438anti-parallel
Strand 4
A
419 425anti-parallel
Strand 5
A
357 360parallel
Back to list of sheets
Back to top of page

There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
241 246first strand
Strand 2
A
253 258anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il