Analysis of interatomic Contacts of Structural Units in PDB entry:
2CB2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2CB2 entry

There are 12 chains in PDB entry 2CB2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 2VAL 30
A
 MET 32GLU 308
B
 PRO 2VAL 30
B
 MET 32GLU 308
C
 PRO 2VAL 30
C
 MET 32GLU 308
D
 PRO 2VAL 30
D
 MET 32GLU 308
E
 PRO 2VAL 30
E
 MET 32GLU 308
F
 PRO 2VAL 30
F
 MET 32GLU 308
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 82 helices in PDB entry 2CB2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 35Right-handed alpha
Helix 2
2
A
82 93Right-handed alpha
Helix 3
3
A
93 103Right-handed alpha
Helix 4
4
A
104 106Right-handed 310
Helix 5
5
A
132 143Right-handed alpha
Helix 6
6
A
145 149Right-handed 310
Helix 7
7
A
172 188Right-handed alpha
Helix 8
8
A
213 222Right-handed alpha
Helix 9
9
A
230 234Right-handed 310
Helix 10
10
A
238 242Right-handed 310
Helix 11
11
A
256 282Right-handed alpha
Helix 12
12
A
301 308Right-handed alpha
Helix 13
13
B
16 35Right-handed alpha
Helix 14
14
B
82 93Right-handed alpha
Helix 15
15
B
93 103Right-handed alpha
Helix 16
16
B
104 106Right-handed 310
Helix 17
17
B
132 143Right-handed alpha
Helix 18
18
B
145 149Right-handed 310
Helix 19
19
B
172 188Right-handed alpha
Helix 20
20
B
213 223Right-handed alpha
Helix 21
21
B
230 234Right-handed 310
Helix 22
22
B
237 242Right-handed 310
Helix 23
23
B
256 265Right-handed alpha
Helix 24
24
B
265 270Right-handed alpha
Helix 25
25
B
270 282Right-handed alpha
Helix 26
26
B
301 307Right-handed alpha
Helix 27
27
C
16 35Right-handed alpha
Helix 28
28
C
82 93Right-handed alpha
Helix 29
29
C
93 103Right-handed alpha
Helix 30
30
C
104 106Right-handed 310
Helix 31
31
C
132 143Right-handed alpha
Helix 32
32
C
145 149Right-handed 310
Helix 33
33
C
172 188Right-handed alpha
Helix 34
34
C
213 222Right-handed alpha
Helix 35
35
C
230 234Right-handed 310
Helix 36
36
C
238 242Right-handed 310
Helix 37
37
C
256 265Right-handed alpha
Helix 38
38
C
265 270Right-handed alpha
Helix 39
39
C
270 282Right-handed alpha
Helix 40
40
C
301 307Right-handed alpha
Helix 41
41
D
16 35Right-handed alpha
Helix 42
42
D
82 93Right-handed alpha
Helix 43
43
D
93 103Right-handed alpha
Helix 44
44
D
104 106Right-handed 310
Helix 45
45
D
132 143Right-handed alpha
Helix 46
46
D
145 149Right-handed 310
Helix 47
47
D
172 188Right-handed alpha
Helix 48
48
D
213 222Right-handed alpha
Helix 49
49
D
230 234Right-handed 310
Helix 50
50
D
237 242Right-handed 310
Helix 51
51
D
256 265Right-handed alpha
Helix 52
52
D
265 270Right-handed alpha
Helix 53
53
D
270 282Right-handed alpha
Helix 54
54
D
301 307Right-handed alpha
Helix 55
55
E
16 35Right-handed alpha
Helix 56
56
E
82 93Right-handed alpha
Helix 57
57
E
93 103Right-handed alpha
Helix 58
58
E
104 106Right-handed 310
Helix 59
59
E
132 143Right-handed alpha
Helix 60
60
E
145 149Right-handed 310
Helix 61
61
E
172 188Right-handed alpha
Helix 62
62
E
213 222Right-handed alpha
Helix 63
63
E
230 234Right-handed 310
Helix 64
64
E
238 242Right-handed 310
Helix 65
65
E
256 265Right-handed alpha
Helix 66
66
E
265 270Right-handed alpha
Helix 67
67
E
270 282Right-handed alpha
Helix 68
68
E
301 307Right-handed alpha
Helix 69
69
F
16 35Right-handed alpha
Helix 70
70
F
82 93Right-handed alpha
Helix 71
71
F
93 103Right-handed alpha
Helix 72
72
F
104 106Right-handed 310
Helix 73
73
F
132 143Right-handed alpha
Helix 74
74
F
145 149Right-handed 310
Helix 75
75
F
172 188Right-handed alpha
Helix 76
76
F
213 222Right-handed alpha
Helix 77
77
F
230 234Right-handed 310
Helix 78
78
F
238 242Right-handed 310
Helix 79
79
F
256 265Right-handed alpha
Helix 80
80
F
265 270Right-handed alpha
Helix 81
81
F
270 282Right-handed alpha
Helix 82
82
F
301 308Right-handed alpha
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There are 6 sheets in PDB entry 2CB2. Click on sheet of interest to get list of strands forming it: AA, BA, CA, DA, EA, FA,

There are 11 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 14first strand
Strand 2
A
71 80anti-parallel
Strand 3
A
40 51anti-parallel
Strand 4
A
284 299anti-parallel
Strand 5
A
160 168anti-parallel
Strand 6
A
246 254anti-parallel
Strand 7
A
193 204anti-parallel
Strand 8
A
115 123anti-parallel
Strand 9
A
5 14parallel
Strand 10
A
71 80anti-parallel
Strand 11
A
5 14anti-parallel
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There are 11 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
5 14first strand
Strand 2
B
71 80anti-parallel
Strand 3
B
40 51anti-parallel
Strand 4
B
284 299anti-parallel
Strand 5
B
160 168anti-parallel
Strand 6
B
246 254anti-parallel
Strand 7
B
193 204anti-parallel
Strand 8
B
115 123anti-parallel
Strand 9
B
5 14parallel
Strand 10
B
71 80anti-parallel
Strand 11
B
5 14anti-parallel
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There are 20 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
5 14first strand
Strand 2
C
71 80anti-parallel
Strand 3
C
40 51anti-parallel
Strand 4
C
284 299anti-parallel
Strand 5
C
40 51anti-parallel
Strand 6
C
71 80anti-parallel
Strand 7
C
71 80first strand
Strand 8
C
5 14anti-parallel
Strand 9
C
108 113anti-parallel
Strand 10
C
5 14anti-parallel
Strand 11
C
115 123anti-parallel
Strand 12
C
5 14anti-parallel
Strand 13
C
160 168first strand
Strand 14
C
246 254anti-parallel
Strand 15
C
193 204anti-parallel
Strand 16
C
115 123anti-parallel
Strand 17
C
246 254first strand
Strand 18
C
160 168anti-parallel
Strand 19
C
284 299anti-parallel
Strand 20
C
40 51anti-parallel
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There are 18 strands in DA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
5 14first strand
Strand 2
D
71 80anti-parallel
Strand 3
D
40 51anti-parallel
Strand 4
D
71 80anti-parallel
Strand 5
D
71 80first strand
Strand 6
D
5 14anti-parallel
Strand 7
D
108 113anti-parallel
Strand 8
D
5 14anti-parallel
Strand 9
D
115 123anti-parallel
Strand 10
D
5 14anti-parallel
Strand 11
D
160 168first strand
Strand 12
D
246 254anti-parallel
Strand 13
D
193 204anti-parallel
Strand 14
D
115 123anti-parallel
Strand 15
D
246 254first strand
Strand 16
D
160 168anti-parallel
Strand 17
D
284 299anti-parallel
Strand 18
D
40 51anti-parallel
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There are 18 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
5 14first strand
Strand 2
E
71 80anti-parallel
Strand 3
E
40 51anti-parallel
Strand 4
E
71 80anti-parallel
Strand 5
E
71 80first strand
Strand 6
E
5 14anti-parallel
Strand 7
E
108 113anti-parallel
Strand 8
E
5 14anti-parallel
Strand 9
E
115 123anti-parallel
Strand 10
E
5 14anti-parallel
Strand 11
E
160 168first strand
Strand 12
E
246 254anti-parallel
Strand 13
E
193 204anti-parallel
Strand 14
E
115 123anti-parallel
Strand 15
E
246 254first strand
Strand 16
E
160 168anti-parallel
Strand 17
E
284 299anti-parallel
Strand 18
E
40 51anti-parallel
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There are 18 strands in FA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
5 14first strand
Strand 2
F
71 80anti-parallel
Strand 3
F
40 51anti-parallel
Strand 4
F
71 80anti-parallel
Strand 5
F
71 80first strand
Strand 6
F
5 14anti-parallel
Strand 7
F
108 113anti-parallel
Strand 8
F
5 14anti-parallel
Strand 9
F
115 123anti-parallel
Strand 10
F
5 14anti-parallel
Strand 11
F
160 168first strand
Strand 12
F
246 254anti-parallel
Strand 13
F
193 204anti-parallel
Strand 14
F
115 123anti-parallel
Strand 15
F
246 254first strand
Strand 16
F
160 168anti-parallel
Strand 17
F
284 299anti-parallel
Strand 18
F
40 51anti-parallel
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