Analysis of interatomic Contacts of Structural Units in PDB entry:
2CFC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2CFC entry

There are 4 chains in PDB entry 2CFC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ILE 250
B
 MET 1ILE 250
C
 MET 1ILE 250
D
 MET 1ILE 250
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 2CFC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 25Right-handed alpha
Helix 2
2
A
35 47Right-handed alpha
Helix 3
3
A
50 52Right-handed 310
Helix 4
4
A
63 79Right-handed alpha
Helix 5
5
A
98 102Right-handed 310
Helix 6
6
A
103 115Right-handed alpha
Helix 7
7
A
115 133Right-handed alpha
Helix 8
8
A
142 146Right-handed 310
Helix 9
9
A
152 174Right-handed alpha
Helix 10
10
A
193 198Right-handed alpha
Helix 11
11
A
199 208Right-handed alpha
Helix 12
12
A
217 230Right-handed alpha
Helix 13
13
A
246 250Right-handed 310
Helix 14
14
B
12 25Right-handed alpha
Helix 15
15
B
35 46Right-handed alpha
Helix 16
16
B
47 52Right-handed 310
Helix 17
17
B
63 79Right-handed alpha
Helix 18
18
B
98 102Right-handed 310
Helix 19
19
B
103 115Right-handed alpha
Helix 20
20
B
115 133Right-handed alpha
Helix 21
21
B
142 146Right-handed 310
Helix 22
22
B
152 174Right-handed alpha
Helix 23
23
B
193 198Right-handed alpha
Helix 24
24
B
199 208Right-handed alpha
Helix 25
25
B
217 230Right-handed alpha
Helix 26
26
B
231 234Right-handed 310
Helix 27
27
B
246 250Right-handed 310
Helix 28
28
C
12 25Right-handed alpha
Helix 29
29
C
35 46Right-handed alpha
Helix 30
30
C
50 52Right-handed 310
Helix 31
31
C
63 79Right-handed alpha
Helix 32
32
C
98 102Right-handed 310
Helix 33
33
C
103 115Right-handed alpha
Helix 34
34
C
115 133Right-handed alpha
Helix 35
35
C
142 146Right-handed 310
Helix 36
36
C
152 174Right-handed alpha
Helix 37
37
C
193 199Right-handed alpha
Helix 38
38
C
199 208Right-handed alpha
Helix 39
39
C
218 230Right-handed alpha
Helix 40
40
C
231 234Right-handed 310
Helix 41
41
C
246 250Right-handed 310
Helix 42
42
D
12 25Right-handed alpha
Helix 43
43
D
35 47Right-handed alpha
Helix 44
44
D
48 52Right-handed 310
Helix 45
45
D
63 79Right-handed alpha
Helix 46
46
D
98 102Right-handed 310
Helix 47
47
D
103 115Right-handed alpha
Helix 48
48
D
115 133Right-handed alpha
Helix 49
49
D
142 146Right-handed 310
Helix 50
50
D
152 174Right-handed alpha
Helix 51
51
D
199 208Right-handed alpha
Helix 52
52
D
217 230Right-handed alpha
Helix 53
53
D
231 234Right-handed 310
Helix 54
54
D
246 250Right-handed 310
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There are 5 sheets in PDB entry 2CFC. Click on sheet of interest to get list of strands forming it: AA, BA, CA, CB, A,

There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 58first strand
Strand 2
A
28 33parallel
Strand 3
A
4 8parallel
Strand 4
A
83 86parallel
Strand 5
A
135 140parallel
Strand 6
A
178 185parallel
Strand 7
A
240 243parallel
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There are 7 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
54 58first strand
Strand 2
B
28 33parallel
Strand 3
B
4 8parallel
Strand 4
B
83 86parallel
Strand 5
B
135 140parallel
Strand 6
B
178 185parallel
Strand 7
B
240 243parallel
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There are 7 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
54 58first strand
Strand 2
C
28 33parallel
Strand 3
C
4 8parallel
Strand 4
C
83 86parallel
Strand 5
C
135 140parallel
Strand 6
C
178 185parallel
Strand 7
C
240 243parallel
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There are 2 strands in CB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
188 189first strand
Strand 2
C
216 217parallel
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There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
54 58first strand
Strand 2
D
28 33parallel
Strand 3
D
4 8parallel
Strand 4
D
83 86parallel
Strand 5
D
135 140parallel
Strand 6
D
178 185parallel
Strand 7
D
240 243parallel
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