Analysis of interatomic Contacts of Structural Units in PDB entry:
2CJR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2CJR entry

There are 8 chains in PDB entry 2CJR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 251PRO 365
B
 ALA 253PRO 365
C
 ALA 253PRO 365
D
 SER 251PRO 365
E
 SER 256PRO 365
F
 ALA 252THR 363
G
 ALA 255THR 363
H
 SER 256PRO 365
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 63 helices in PDB entry 2CJR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
259 263Right-handed 310
Helix 2
2
A
270 276Right-handed alpha
Helix 3
3
A
289 296Right-handed alpha
Helix 4
4
A
297 299Right-handed 310
Helix 5
5
A
301 307Right-handed alpha
Helix 6
6
A
311 318Right-handed alpha
Helix 7
7
A
346 358Right-handed alpha
Helix 8
8
A
359 363Right-handed 310
Helix 9
9
B
259 263Right-handed 310
Helix 10
10
B
270 276Right-handed alpha
Helix 11
11
B
289 296Right-handed alpha
Helix 12
12
B
297 299Right-handed 310
Helix 13
13
B
301 307Right-handed alpha
Helix 14
14
B
311 319Right-handed alpha
Helix 15
15
B
346 358Right-handed alpha
Helix 16
16
B
359 364Right-handed 310
Helix 17
17
C
259 263Right-handed 310
Helix 18
18
C
270 276Right-handed alpha
Helix 19
19
C
289 296Right-handed alpha
Helix 20
20
C
297 299Right-handed 310
Helix 21
21
C
301 307Right-handed alpha
Helix 22
22
C
311 319Right-handed alpha
Helix 23
23
C
346 358Right-handed alpha
Helix 24
24
C
359 364Right-handed 310
Helix 25
25
D
259 263Right-handed 310
Helix 26
26
D
270 276Right-handed alpha
Helix 27
27
D
289 296Right-handed alpha
Helix 28
28
D
297 299Right-handed 310
Helix 29
29
D
301 307Right-handed alpha
Helix 30
30
D
311 319Right-handed alpha
Helix 31
31
D
346 358Right-handed alpha
Helix 32
32
D
359 364Right-handed 310
Helix 33
33
E
259 263Right-handed 310
Helix 34
34
E
270 276Right-handed alpha
Helix 35
35
E
289 296Right-handed alpha
Helix 36
36
E
297 299Right-handed 310
Helix 37
37
E
301 307Right-handed alpha
Helix 38
38
E
312 317Right-handed alpha
Helix 39
39
E
346 358Right-handed alpha
Helix 40
40
E
359 363Right-handed 310
Helix 41
41
F
259 263Right-handed 310
Helix 42
42
F
270 276Right-handed alpha
Helix 43
43
F
289 296Right-handed alpha
Helix 44
44
F
297 299Right-handed 310
Helix 45
45
F
301 306Right-handed alpha
Helix 46
46
F
307 309Right-handed 310
Helix 47
47
F
311 319Right-handed alpha
Helix 48
48
F
348 358Right-handed alpha
Helix 49
49
G
259 263Right-handed 310
Helix 50
50
G
270 276Right-handed alpha
Helix 51
51
G
289 296Right-handed alpha
Helix 52
52
G
297 299Right-handed 310
Helix 53
53
G
301 307Right-handed alpha
Helix 54
54
G
311 319Right-handed alpha
Helix 55
55
G
344 347Right-handed 310
Helix 56
56
G
348 359Right-handed alpha
Helix 57
57
H
259 263Right-handed 310
Helix 58
58
H
270 276Right-handed alpha
Helix 59
59
H
289 296Right-handed alpha
Helix 60
60
H
297 299Right-handed 310
Helix 61
61
H
301 307Right-handed alpha
Helix 62
62
H
311 319Right-handed alpha
Helix 63
63
H
346 358Right-handed alpha
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There are 4 sheets in PDB entry 2CJR. Click on sheet of interest to get list of strands forming it: AA, CA, EA, GA,

There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
322 325first strand
Strand 2
A
330 339anti-parallel
Strand 3
B
329 339anti-parallel
Strand 4
B
320 326anti-parallel
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There are 4 strands in CA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
320 325first strand
Strand 2
C
330 340anti-parallel
Strand 3
D
329 339anti-parallel
Strand 4
D
320 326anti-parallel
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There are 4 strands in EA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
320 323first strand
Strand 2
E
331 339anti-parallel
Strand 3
F
331 339anti-parallel
Strand 4
F
320 324anti-parallel
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There are 4 strands in GA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
320 325first strand
Strand 2
G
330 339anti-parallel
Strand 3
H
331 339anti-parallel
Strand 4
H
320 324anti-parallel
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