Analysis of interatomic Contacts of Structural Units in PDB entry:
2CN3

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 2CN3 entry

There are 2 chains in PDB entry 2CN3 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 33	SER 760
B	VAL 33	SER 760

There are 9 helices in PDB entry 2CN3. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	92	99	Right-handed 310
Helix 2	2	A	228	231	Right-handed 310
Helix 3	3	A	390	395	Right-handed 310
Helix 4	4	A	438	445	Right-handed 310
Helix 5	5	B	92	99	Right-handed 310
Helix 6	6	B	212	216	Right-handed 310
Helix 7	7	B	228	231	Right-handed 310
Helix 8	8	B	390	395	Right-handed 310
Helix 9	9	B	438	445	Right-handed 310

There are 30 sheets in PDB entry 2CN3. Click on sheet of interest to get list of strands forming it: AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN, AO, BA, BB, BC, BD, BE, BF, BG, BH, BI, BJ, BK, BL, BM, BN, BO,

There are 5 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	34	35	first strand
Strand 2	A	718	719	parallel
Strand 3	A	704	710	anti-parallel
Strand 4	A	694	701	anti-parallel
Strand 5	A	677	684	anti-parallel

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There are 4 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	38	43	first strand
Strand 2	A	753	758	anti-parallel
Strand 3	A	740	747	anti-parallel
Strand 4	A	734	737	anti-parallel

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There are 4 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	54	57	first strand
Strand 2	A	65	68	anti-parallel
Strand 3	A	74	78	anti-parallel
Strand 4	A	83	86	anti-parallel

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There are 4 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	101	106	first strand
Strand 2	A	114	118	anti-parallel
Strand 3	A	131	135	anti-parallel
Strand 4	A	143	146	anti-parallel

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There are 4 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	164	166	first strand
Strand 2	A	174	177	anti-parallel
Strand 3	A	184	187	anti-parallel
Strand 4	A	195	196	anti-parallel

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There are 4 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	221	226	first strand
Strand 2	A	240	244	anti-parallel
Strand 3	A	251	254	anti-parallel
Strand 4	A	262	263	anti-parallel

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There are 4 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	272	278	first strand
Strand 2	A	283	289	anti-parallel
Strand 3	A	301	307	anti-parallel
Strand 4	A	313	315	anti-parallel

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There are 4 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	329	335	first strand
Strand 2	A	343	348	anti-parallel
Strand 3	A	357	360	anti-parallel
Strand 4	A	368	369	anti-parallel

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There are 2 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	371	373	first strand
Strand 2	A	379	381	anti-parallel

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There are 5 strands in AJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	383	386	first strand
Strand 2	A	448	452	parallel
Strand 3	A	433	436	anti-parallel
Strand 4	A	425	428	anti-parallel
Strand 5	A	415	417	anti-parallel

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There are 3 strands in AK sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	462	466	first strand
Strand 2	A	474	478	anti-parallel
Strand 3	A	485	486	anti-parallel

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There are 3 strands in AL sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	503	510	first strand
Strand 2	A	513	522	anti-parallel
Strand 3	A	531	534	anti-parallel

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There are 4 strands in AM sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	556	559	first strand
Strand 2	A	566	569	anti-parallel
Strand 3	A	576	578	anti-parallel
Strand 4	A	586	587	anti-parallel

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There are 4 strands in AN sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	596	599	first strand
Strand 2	A	607	611	anti-parallel
Strand 3	A	614	618	anti-parallel
Strand 4	A	626	627	anti-parallel

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There are 4 strands in AO sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	639	643	first strand
Strand 2	A	646	653	anti-parallel
Strand 3	A	659	662	anti-parallel
Strand 4	A	670	671	anti-parallel

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There are 5 strands in BA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	34	35	first strand
Strand 2	B	718	719	parallel
Strand 3	B	704	710	anti-parallel
Strand 4	B	694	701	anti-parallel
Strand 5	B	677	684	anti-parallel

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There are 4 strands in BB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	38	43	first strand
Strand 2	B	753	758	anti-parallel
Strand 3	B	740	747	anti-parallel
Strand 4	B	734	737	anti-parallel

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There are 4 strands in BC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	54	57	first strand
Strand 2	B	65	68	anti-parallel
Strand 3	B	74	78	anti-parallel
Strand 4	B	83	86	anti-parallel

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There are 4 strands in BD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	101	106	first strand
Strand 2	B	114	118	anti-parallel
Strand 3	B	131	135	anti-parallel
Strand 4	B	143	146	anti-parallel

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There are 4 strands in BE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	164	166	first strand
Strand 2	B	174	177	anti-parallel
Strand 3	B	184	187	anti-parallel
Strand 4	B	195	196	anti-parallel

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There are 4 strands in BF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	221	226	first strand
Strand 2	B	240	244	anti-parallel
Strand 3	B	251	254	anti-parallel
Strand 4	B	262	263	anti-parallel

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There are 4 strands in BG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	272	278	first strand
Strand 2	B	283	289	anti-parallel
Strand 3	B	301	307	anti-parallel
Strand 4	B	313	315	anti-parallel

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There are 4 strands in BH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	329	335	first strand
Strand 2	B	343	348	anti-parallel
Strand 3	B	357	360	anti-parallel
Strand 4	B	368	369	anti-parallel

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There are 2 strands in BI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	371	373	first strand
Strand 2	B	379	381	anti-parallel

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There are 5 strands in BJ sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	383	386	first strand
Strand 2	B	448	452	parallel
Strand 3	B	433	436	anti-parallel
Strand 4	B	425	428	anti-parallel
Strand 5	B	415	417	anti-parallel

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There are 3 strands in BK sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	462	466	first strand
Strand 2	B	474	478	anti-parallel
Strand 3	B	485	486	anti-parallel

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There are 3 strands in BL sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	503	510	first strand
Strand 2	B	513	522	anti-parallel
Strand 3	B	531	534	anti-parallel

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There are 4 strands in BM sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	556	559	first strand
Strand 2	B	566	569	anti-parallel
Strand 3	B	576	578	anti-parallel
Strand 4	B	586	587	anti-parallel

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There are 4 strands in BN sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	596	599	first strand
Strand 2	B	607	611	anti-parallel
Strand 3	B	614	618	anti-parallel
Strand 4	B	626	627	anti-parallel

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There are 4 strands in BO sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	639	642	first strand
Strand 2	B	650	653	anti-parallel
Strand 3	B	659	662	anti-parallel
Strand 4	B	670	671	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 2CN3

Analysis of interatomic Contacts of Structural Units in PDB entry:
2CN3