Analysis of interatomic Contacts of Structural Units in PDB entry:
2CSX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2CSX entry

There are 4 chains in PDB entry 2CSX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 G 1 C 74
D
 G 1 C 74
A
 MET 1GLY 497
B
 MET 1GLY 497
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 43 helices in PDB entry 2CSX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
21 41Right-handed alpha
Helix 2
2
A
55 60Right-handed alpha
Helix 3
3
A
60 65Right-handed alpha
Helix 4
4
A
68 87Right-handed alpha
Helix 5
5
A
99 116Right-handed alpha
Helix 6
6
A
169 180Right-handed alpha
Helix 7
7
A
186 200Right-handed alpha
Helix 8
8
A
229 235Right-handed alpha
Helix 9
9
A
235 240Right-handed alpha
Helix 10
10
A
241 243Right-handed 310
Helix 11
11
A
244 249Right-handed alpha
Helix 12
12
A
260 266Right-handed alpha
Helix 13
13
A
266 276Right-handed alpha
Helix 14
14
A
305 314Right-handed alpha
Helix 15
15
A
314 325Right-handed alpha
Helix 16
16
A
335 346Right-handed alpha
Helix 17
17
A
351 366Right-handed alpha
Helix 18
18
A
377 394Right-handed alpha
Helix 19
19
A
397 420Right-handed alpha
Helix 20
20
A
420 426Right-handed alpha
Helix 21
21
A
429 452Right-handed alpha
Helix 22
22
A
455 466Right-handed alpha
Helix 23
23
B
21 40Right-handed alpha
Helix 24
24
B
55 65Right-handed alpha
Helix 25
25
B
68 87Right-handed alpha
Helix 26
26
B
99 116Right-handed alpha
Helix 27
27
B
169 180Right-handed alpha
Helix 28
28
B
181 184Right-handed 310
Helix 29
29
B
186 200Right-handed alpha
Helix 30
30
B
229 234Right-handed alpha
Helix 31
31
B
235 240Right-handed alpha
Helix 32
32
B
244 249Right-handed alpha
Helix 33
33
B
260 266Right-handed alpha
Helix 34
34
B
266 276Right-handed alpha
Helix 35
35
B
305 314Right-handed alpha
Helix 36
36
B
314 325Right-handed alpha
Helix 37
37
B
335 346Right-handed alpha
Helix 38
38
B
350 365Right-handed alpha
Helix 39
39
B
375 394Right-handed alpha
Helix 40
40
B
397 418Right-handed alpha
Helix 41
41
B
420 426Right-handed alpha
Helix 42
42
B
429 452Right-handed alpha
Helix 43
43
B
455 466Right-handed alpha
Back to top of page

There are 11 sheets in PDB entry 2CSX. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 15first strand
Strand 2
A
44 52parallel
Strand 3
A
93 96parallel
Back to list of sheets
Back to top of page

There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
119 123first strand
Strand 2
A
160 164anti-parallel
Strand 3
A
204 205anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
207 209first strand
Strand 2
A
222 227anti-parallel
Strand 3
A
217 219anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
254 257first strand
Strand 2
A
283 286parallel
Back to list of sheets
Back to top of page

There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
289 290first strand
Strand 2
A
332 333parallel
Back to list of sheets
Back to top of page

There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 15first strand
Strand 2
B
44 52parallel
Strand 3
B
93 96parallel
Back to list of sheets
Back to top of page

There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
119 123first strand
Strand 2
B
160 164anti-parallel
Strand 3
B
204 205anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
208 209first strand
Strand 2
B
222 227anti-parallel
Strand 3
B
217 219anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
254 257first strand
Strand 2
B
283 286parallel
Back to list of sheets
Back to top of page

There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
289 290first strand
Strand 2
B
332 333parallel
Back to list of sheets
Back to top of page

There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
370 371first strand
Strand 2
B
482 483anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il