Analysis of interatomic Contacts of Structural Units in PDB entry:
2CV9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2CV9 entry

There are 4 chains in PDB entry 2CV9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1PRO 252
B
 MSE 1PRO 252
C
 MSE 1PRO 252
D
 MSE 1PRO 252
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 2CV9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 26Right-handed alpha
Helix 2
2
A
27 29Right-handed 310
Helix 3
3
A
46 57Right-handed alpha
Helix 4
4
A
72 80Right-handed alpha
Helix 5
5
A
123 135Right-handed alpha
Helix 6
6
A
148 160Right-handed alpha
Helix 7
7
A
204 215Right-handed alpha
Helix 8
8
B
11 26Right-handed alpha
Helix 9
9
B
27 29Right-handed 310
Helix 10
10
B
46 57Right-handed alpha
Helix 11
11
B
72 80Right-handed alpha
Helix 12
12
B
123 135Right-handed alpha
Helix 13
13
B
148 160Right-handed alpha
Helix 14
14
B
204 215Right-handed alpha
Helix 15
15
C
11 26Right-handed alpha
Helix 16
16
C
27 29Right-handed 310
Helix 17
17
C
46 57Right-handed alpha
Helix 18
18
C
66 71Right-handed 310
Helix 19
19
C
72 80Right-handed alpha
Helix 20
20
C
123 135Right-handed alpha
Helix 21
21
C
148 160Right-handed alpha
Helix 22
22
C
204 215Right-handed alpha
Helix 23
23
D
11 26Right-handed alpha
Helix 24
24
D
27 29Right-handed 310
Helix 25
25
D
46 56Right-handed alpha
Helix 26
26
D
64 70Right-handed 310
Helix 27
27
D
71 80Right-handed alpha
Helix 28
28
D
123 135Right-handed alpha
Helix 29
29
D
148 159Right-handed alpha
Helix 30
30
D
204 215Right-handed alpha
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There are 8 sheets in PDB entry 2CV9. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
82 83first strand
Strand 2
A
60 62parallel
Strand 3
A
31 35parallel
Strand 4
A
2 6parallel
Strand 5
A
228 237anti-parallel
Strand 6
A
240 250anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
97 102first strand
Strand 2
A
105 113anti-parallel
Strand 3
A
139 145parallel
Strand 4
A
165 169parallel
Strand 5
A
186 188parallel
Strand 6
A
179 180anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
82 83first strand
Strand 2
B
60 62parallel
Strand 3
B
31 35parallel
Strand 4
B
2 6parallel
Strand 5
B
228 237anti-parallel
Strand 6
B
240 250anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
97 102first strand
Strand 2
B
105 113anti-parallel
Strand 3
B
139 145parallel
Strand 4
B
165 169parallel
Strand 5
B
186 188parallel
Strand 6
B
179 180anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
82 83first strand
Strand 2
C
60 62parallel
Strand 3
C
31 35parallel
Strand 4
C
2 6parallel
Strand 5
C
228 237anti-parallel
Strand 6
C
240 250anti-parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
97 102first strand
Strand 2
C
105 113anti-parallel
Strand 3
C
139 145parallel
Strand 4
C
165 169parallel
Strand 5
C
186 188parallel
Strand 6
C
179 180anti-parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
82 83first strand
Strand 2
D
60 62parallel
Strand 3
D
31 35parallel
Strand 4
D
2 6parallel
Strand 5
D
228 237anti-parallel
Strand 6
D
240 250anti-parallel
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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
97 102first strand
Strand 2
D
105 113anti-parallel
Strand 3
D
139 145parallel
Strand 4
D
165 169parallel
Strand 5
D
186 188parallel
Strand 6
D
179 180anti-parallel
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