Analysis of interatomic Contacts of Structural Units in PDB entry:
2CVT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2CVT entry

There is 1 chain in PDB entry 2CVT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 76GLN 746
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 2CVT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
80 85Right-handed alpha
Helix 2
2
A
93 104Right-handed alpha
Helix 3
3
A
117 135Right-handed alpha
Helix 4
4
A
136 142Right-handed 310
Helix 5
5
A
144 155Right-handed alpha
Helix 6
6
A
166 179Right-handed alpha
Helix 7
7
A
182 195Right-handed alpha
Helix 8
8
A
201 208Right-handed alpha
Helix 9
9
A
227 241Right-handed alpha
Helix 10
10
A
272 286Right-handed alpha
Helix 11
11
A
307 314Right-handed alpha
Helix 12
12
A
335 344Right-handed alpha
Helix 13
13
A
363 377Right-handed alpha
Helix 14
14
A
385 400Right-handed alpha
Helix 15
15
A
407 413Right-handed alpha
Helix 16
16
A
466 488Right-handed alpha
Helix 17
17
A
492 503Right-handed alpha
Helix 18
18
A
511 519Right-handed alpha
Helix 19
19
A
527 555Right-handed alpha
Helix 20
20
A
564 568Right-handed 310
Helix 21
21
A
570 575Right-handed alpha
Helix 22
22
A
584 596Right-handed alpha
Helix 23
23
A
643 653Right-handed alpha
Helix 24
24
A
661 666Right-handed alpha
Helix 25
25
A
677 684Right-handed alpha
Helix 26
26
A
691 703Right-handed alpha
Helix 27
27
A
704 706Right-handed 310
Helix 28
28
A
722 734Right-handed alpha
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There are 4 sheets in PDB entry 2CVT. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
198 200first strand
Strand 2
A
445 449anti-parallel
Strand 3
A
506 510parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
403 406first strand
Strand 2
A
328 334parallel
Strand 3
A
297 301parallel
Strand 4
A
248 251parallel
Strand 5
A
219 222parallel
Strand 6
A
441 442anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
347 348first strand
Strand 2
A
383 384anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
454 455first strand
Strand 2
A
464 465anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il