Analysis of interatomic Contacts of Structural Units in PDB entry:
2CZR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2CZR entry

There is 1 chain in PDB entry 2CZR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -8SER 218
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 2CZR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
-6 4Right-handed alpha
Helix 2
2
A
6 17Right-handed alpha
Helix 3
3
A
49 57Right-handed alpha
Helix 4
4
A
88 99Right-handed alpha
Helix 5
5
A
123 133Right-handed alpha
Helix 6
6
A
160 167Right-handed alpha
Helix 7
7
A
171 175Right-handed 310
Helix 8
8
A
201 205Right-handed 310
Helix 9
9
A
206 217Right-handed alpha
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There are 3 sheets in PDB entry 2CZR. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 27first strand
Strand 2
A
30 35anti-parallel
Strand 3
A
41 46anti-parallel
Strand 4
A
64 69parallel
Strand 5
A
81 85parallel
Strand 6
A
75 78anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
113 122first strand
Strand 2
A
100 110anti-parallel
Strand 3
A
177 179anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
155 157first strand
Strand 2
A
141 148anti-parallel
Strand 3
A
181 186anti-parallel
Strand 4
A
191 194anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il