Analysis of interatomic Contacts of Structural Units in PDB entry:
2D0W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2D0W entry

There are 2 chains in PDB entry 2D0W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1SER 168
B
 ALA 1SER 168
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 2D0W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 20Right-handed alpha
Helix 2
2
A
27 37Right-handed alpha
Helix 3
3
A
44 46Right-handed 310
Helix 4
4
A
47 59Right-handed alpha
Helix 5
5
A
59 64Right-handed alpha
Helix 6
6
A
82 86Right-handed 310
Helix 7
7
A
87 98Right-handed alpha
Helix 8
8
A
111 125Right-handed alpha
Helix 9
9
A
137 144Right-handed alpha
Helix 10
10
A
148 155Right-handed alpha
Helix 11
11
A
155 162Right-handed alpha
Helix 12
12
B
15 20Right-handed alpha
Helix 13
13
B
27 37Right-handed alpha
Helix 14
14
B
44 46Right-handed 310
Helix 15
15
B
47 59Right-handed alpha
Helix 16
16
B
59 64Right-handed alpha
Helix 17
17
B
82 86Right-handed 310
Helix 18
18
B
87 98Right-handed alpha
Helix 19
19
B
111 125Right-handed alpha
Helix 20
20
B
137 143Right-handed alpha
Helix 21
21
B
148 155Right-handed alpha
Helix 22
22
B
155 163Right-handed alpha
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There are no sheets in PDB entry 2D0W
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il