Analysis of interatomic Contacts of Structural Units in PDB entry:
2D2N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2D2N entry

There are 4 chains in PDB entry 2D2N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 1GLY 140
B
 ASP 1GLY 142
C
 SER 2LEU 147
D
 GLU 1LEU 145
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 33 helices in PDB entry 2D2N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 19Right-handed alpha
Helix 2
2
A
23 38Right-handed alpha
Helix 3
3
A
39 44Right-handed alpha
Helix 4
4
A
45 47Right-handed 310
Helix 5
5
A
56 75Right-handed alpha
Helix 6
6
A
79 92Right-handed alpha
Helix 7
7
A
100 115Right-handed alpha
Helix 8
8
A
116 119Right-handed 310
Helix 9
9
A
123 139Right-handed alpha
Helix 10
10
B
3 18Right-handed alpha
Helix 11
11
B
22 38Right-handed alpha
Helix 12
12
B
39 47Right-handed 310
Helix 13
13
B
56 77Right-handed alpha
Helix 14
14
B
79 95Right-handed alpha
Helix 15
15
B
100 102Right-handed 310
Helix 16
16
B
103 120Right-handed alpha
Helix 17
17
B
125 141Right-handed alpha
Helix 18
18
C
5 16Right-handed alpha
Helix 19
19
C
24 42Right-handed alpha
Helix 20
20
C
43 48Right-handed alpha
Helix 21
21
C
49 51Right-handed 310
Helix 22
22
C
60 79Right-handed alpha
Helix 23
23
C
80 82Right-handed 310
Helix 24
24
C
83 100Right-handed alpha
Helix 25
25
C
107 120Right-handed alpha
Helix 26
26
C
121 123Right-handed 310
Helix 27
27
C
128 145Right-handed alpha
Helix 28
28
D
4 19Right-handed alpha
Helix 29
29
D
27 43Right-handed alpha
Helix 30
30
D
58 77Right-handed alpha
Helix 31
31
D
81 98Right-handed alpha
Helix 32
32
D
103 122Right-handed alpha
Helix 33
33
D
126 143Right-handed alpha
Back to top of page
There are no sheets in PDB entry 2D2N
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il