Analysis of interatomic Contacts of Structural Units in PDB entry:
2DB0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2DB0 entry

There are 2 chains in PDB entry 2DB0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 9LEU 247
B
 ASP 9GLU 248
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 2DB0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 16Right-handed alpha
Helix 2
2
A
19 30Right-handed alpha
Helix 3
3
A
30 41Right-handed alpha
Helix 4
4
A
45 61Right-handed alpha
Helix 5
5
A
62 65Right-handed 310
Helix 6
6
A
66 81Right-handed alpha
Helix 7
7
A
83 101Right-handed alpha
Helix 8
8
A
101 116Right-handed alpha
Helix 9
9
A
120 138Right-handed alpha
Helix 10
10
A
138 153Right-handed alpha
Helix 11
11
A
157 170Right-handed alpha
Helix 12
12
A
175 180Right-handed alpha
Helix 13
13
A
182 188Right-handed alpha
Helix 14
14
A
189 192Right-handed 310
Helix 15
15
A
194 210Right-handed alpha
Helix 16
16
A
212 226Right-handed alpha
Helix 17
17
A
230 247Right-handed alpha
Helix 18
18
B
9 16Right-handed alpha
Helix 19
19
B
19 30Right-handed alpha
Helix 20
20
B
30 41Right-handed alpha
Helix 21
21
B
45 60Right-handed alpha
Helix 22
22
B
61 65Right-handed 310
Helix 23
23
B
66 81Right-handed alpha
Helix 24
24
B
83 101Right-handed alpha
Helix 25
25
B
101 113Right-handed alpha
Helix 26
26
B
120 138Right-handed alpha
Helix 27
27
B
138 151Right-handed alpha
Helix 28
28
B
152 155Right-handed 310
Helix 29
29
B
157 169Right-handed alpha
Helix 30
30
B
175 180Right-handed alpha
Helix 31
31
B
182 188Right-handed alpha
Helix 32
32
B
189 192Right-handed 310
Helix 33
33
B
194 212Right-handed alpha
Helix 34
34
B
212 225Right-handed alpha
Helix 35
35
B
230 246Right-handed alpha
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There are no sheets in PDB entry 2DB0
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