Analysis of interatomic Contacts of Structural Units in PDB entry:
2DG8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2DG8 entry

There are 4 chains in PDB entry 2DG8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 7ASP 181
B
 PRO 8PRO 183
C
 GLN 9ARG 182
D
 PRO 8THR 180
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 2DG8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 26Right-handed alpha
Helix 2
2
A
27 30Right-handed 310
Helix 3
3
A
31 40Right-handed alpha
Helix 4
4
A
44 50Right-handed alpha
Helix 5
5
A
52 78Right-handed alpha
Helix 6
6
A
81 99Right-handed alpha
Helix 7
7
A
100 117Right-handed alpha
Helix 8
8
A
120 136Right-handed alpha
Helix 9
9
A
140 160Right-handed alpha
Helix 10
10
A
166 178Right-handed alpha
Helix 11
11
B
9 26Right-handed alpha
Helix 12
12
B
27 30Right-handed 310
Helix 13
13
B
31 40Right-handed alpha
Helix 14
14
B
42 50Right-handed alpha
Helix 15
15
B
53 78Right-handed alpha
Helix 16
16
B
81 99Right-handed alpha
Helix 17
17
B
100 117Right-handed alpha
Helix 18
18
B
120 136Right-handed alpha
Helix 19
19
B
140 161Right-handed alpha
Helix 20
20
B
166 178Right-handed alpha
Helix 21
21
C
11 26Right-handed alpha
Helix 22
22
C
27 30Right-handed 310
Helix 23
23
C
31 40Right-handed alpha
Helix 24
24
C
43 50Right-handed alpha
Helix 25
25
C
52 77Right-handed alpha
Helix 26
26
C
81 98Right-handed alpha
Helix 27
27
C
100 117Right-handed alpha
Helix 28
28
C
120 136Right-handed alpha
Helix 29
29
C
140 160Right-handed alpha
Helix 30
30
C
166 178Right-handed alpha
Helix 31
31
D
9 26Right-handed alpha
Helix 32
32
D
27 30Right-handed 310
Helix 33
33
D
31 40Right-handed alpha
Helix 34
34
D
42 50Right-handed alpha
Helix 35
35
D
52 73Right-handed alpha
Helix 36
36
D
81 99Right-handed alpha
Helix 37
37
D
100 117Right-handed alpha
Helix 38
38
D
120 136Right-handed alpha
Helix 39
39
D
140 160Right-handed alpha
Helix 40
40
D
166 178Right-handed alpha
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There are no sheets in PDB entry 2DG8
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il