Analysis of interatomic Contacts of Structural Units in PDB entry:
2DQB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2DQB entry

There are 6 chains in PDB entry 2DQB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1PRO 376
B
 MSE 1PRO 376
C
 MSE 1PRO 376
D
 MSE 1PRO 376
E
 MSE 1PRO 376
F
 MSE 1PRO 376
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are131 helices in PDB entry 2DQB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 16Right-handed alpha
Helix 2
2
A
22 26Right-handed 310
Helix 3
3
A
40 52Right-handed alpha
Helix 4
4
A
52 58Right-handed alpha
Helix 5
5
A
59 61Right-handed 310
Helix 6
6
A
75 94Right-handed alpha
Helix 7
7
A
97 108Right-handed alpha
Helix 8
8
A
117 127Right-handed alpha
Helix 9
9
A
134 145Right-handed alpha
Helix 10
10
A
159 169Right-handed alpha
Helix 11
11
A
186 211Right-handed alpha
Helix 12
12
A
215 221Right-handed 310
Helix 13
13
A
222 232Right-handed alpha
Helix 14
14
A
240 271Right-handed alpha
Helix 15
15
A
274 281Right-handed alpha
Helix 16
16
A
289 307Right-handed alpha
Helix 17
17
A
310 334Right-handed alpha
Helix 18
18
A
335 338Right-handed 310
Helix 19
19
A
339 344Right-handed alpha
Helix 20
20
A
345 350Right-handed alpha
Helix 21
21
A
350 361Right-handed alpha
Helix 22
22
A
363 374Right-handed alpha
Helix 23
23
B
4 16Right-handed alpha
Helix 24
24
B
22 26Right-handed 310
Helix 25
25
B
40 51Right-handed alpha
Helix 26
26
B
52 59Right-handed alpha
Helix 27
27
B
75 93Right-handed alpha
Helix 28
28
B
97 108Right-handed alpha
Helix 29
29
B
117 127Right-handed alpha
Helix 30
30
B
134 145Right-handed alpha
Helix 31
31
B
159 166Right-handed alpha
Helix 32
32
B
186 211Right-handed alpha
Helix 33
33
B
217 221Right-handed 310
Helix 34
34
B
222 231Right-handed alpha
Helix 35
35
B
241 270Right-handed alpha
Helix 36
36
B
274 281Right-handed alpha
Helix 37
37
B
288 307Right-handed alpha
Helix 38
38
B
310 334Right-handed alpha
Helix 39
39
B
335 338Right-handed 310
Helix 40
40
B
339 344Right-handed alpha
Helix 41
41
B
345 350Right-handed alpha
Helix 42
42
B
350 361Right-handed alpha
Helix 43
43
B
363 373Right-handed alpha
Helix 44
44
C
4 16Right-handed alpha
Helix 45
45
C
22 26Right-handed 310
Helix 46
46
C
40 52Right-handed alpha
Helix 47
47
C
52 58Right-handed alpha
Helix 48
48
C
59 61Right-handed 310
Helix 49
49
C
75 94Right-handed alpha
Helix 50
50
C
97 108Right-handed alpha
Helix 51
51
C
116 127Right-handed alpha
Helix 52
52
C
128 131Right-handed 310
Helix 53
53
C
134 145Right-handed alpha
Helix 54
54
C
159 168Right-handed alpha
Helix 55
55
C
186 211Right-handed alpha
Helix 56
56
C
215 221Right-handed 310
Helix 57
57
C
222 233Right-handed alpha
Helix 58
58
C
240 271Right-handed alpha
Helix 59
59
C
274 281Right-handed alpha
Helix 60
60
C
289 307Right-handed alpha
Helix 61
61
C
310 334Right-handed alpha
Helix 62
62
C
335 338Right-handed 310
Helix 63
63
C
339 344Right-handed alpha
Helix 64
64
C
345 350Right-handed alpha
Helix 65
65
C
350 361Right-handed alpha
Helix 66
66
C
363 373Right-handed alpha
Helix 67
67
D
4 16Right-handed alpha
Helix 68
68
D
22 26Right-handed 310
Helix 69
69
D
40 51Right-handed alpha
Helix 70
70
D
52 59Right-handed alpha
Helix 71
71
D
75 94Right-handed alpha
Helix 72
72
D
97 108Right-handed alpha
Helix 73
73
D
116 126Right-handed alpha
Helix 74
74
D
134 145Right-handed alpha
Helix 75
75
D
159 169Right-handed alpha
Helix 76
76
D
186 211Right-handed alpha
Helix 77
77
D
217 221Right-handed 310
Helix 78
78
D
222 231Right-handed alpha
Helix 79
79
D
240 271Right-handed alpha
Helix 80
80
D
274 281Right-handed alpha
Helix 81
81
D
288 307Right-handed alpha
Helix 82
82
D
310 334Right-handed alpha
Helix 83
83
D
335 338Right-handed 310
Helix 84
84
D
339 344Right-handed alpha
Helix 85
85
D
345 350Right-handed alpha
Helix 86
86
D
350 361Right-handed alpha
Helix 87
87
D
363 374Right-handed alpha
Helix 88
88
E
4 13Right-handed alpha
Helix 89
89
E
22 26Right-handed 310
Helix 90
90
E
40 51Right-handed alpha
Helix 91
91
E
52 58Right-handed alpha
Helix 92
92
E
59 61Right-handed 310
Helix 93
93
E
75 94Right-handed alpha
Helix 94
94
E
97 108Right-handed alpha
Helix 95
95
E
118 127Right-handed alpha
Helix 96
96
E
134 145Right-handed alpha
Helix 97
97
E
159 168Right-handed alpha
Helix 98
98
E
186 211Right-handed alpha
Helix 99
99
E
215 219Right-handed 310
Helix 100
100
E
222 232Right-handed alpha
Helix 101
101
E
240 271Right-handed alpha
Helix 102
102
E
274 280Right-handed alpha
Helix 103
103
E
288 307Right-handed alpha
Helix 104
104
E
310 334Right-handed alpha
Helix 105
105
E
335 338Right-handed 310
Helix 106
106
E
339 344Right-handed alpha
Helix 107
107
E
345 350Right-handed alpha
Helix 108
108
E
350 361Right-handed alpha
Helix 109
109
E
363 373Right-handed alpha
Helix 110
110
F
4 16Right-handed alpha
Helix 111
111
F
22 26Right-handed 310
Helix 112
112
F
40 51Right-handed alpha
Helix 113
113
F
52 58Right-handed alpha
Helix 114
114
F
59 61Right-handed 310
Helix 115
115
F
75 94Right-handed alpha
Helix 116
116
F
97 108Right-handed alpha
Helix 117
117
F
117 127Right-handed alpha
Helix 118
118
F
134 145Right-handed alpha
Helix 119
119
F
159 170Right-handed alpha
Helix 120
120
F
186 211Right-handed alpha
Helix 121
121
F
217 221Right-handed 310
Helix 122
122
F
222 232Right-handed alpha
Helix 123
123
F
240 269Right-handed alpha
Helix 124
124
F
274 280Right-handed alpha
Helix 125
125
F
288 307Right-handed alpha
Helix 126
126
F
310 334Right-handed alpha
Helix 127
127
F
335 338Right-handed 310
Helix 128
128
F
339 345Right-handed alpha
Helix 129
129
F
345 350Right-handed alpha
Helix 130
130
F
350 361Right-handed alpha
Helix 131
131
F
363 373Right-handed alpha
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There are no sheets in PDB entry 2DQB
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