Analysis of interatomic Contacts of Structural Units in PDB entry:
2DZ6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2DZ6 entry

There is 1 chain in PDB entry 2DZ6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue

 LEU 29THR 1960
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 2DZ6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
101 106Right-handed 310
Helix 2
2
167 176Right-handed alpha
Helix 3
3
202 207Right-handed alpha
Helix 4
4
210 214Right-handed 310
Helix 5
5
222 227Right-handed alpha
Helix 6
6
237 242Right-handed alpha
Helix 7
7
884 892Right-handed alpha
Helix 8
8
979 990Right-handed alpha
Helix 9
9
1007 1017Right-handed alpha
Helix 10
10
1018 1021Right-handed 310
Helix 11
11
1061 1069Right-handed alpha
Helix 12
12
1408 1413Right-handed alpha
Helix 13
13
1433 1437Right-handed 310
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There are 6 sheets in PDB entry 2DZ6. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1

252 254first strand
Strand 2

258 260anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1

331 333first strand
Strand 2

338 341parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1

1153 1154first strand
Strand 2

1163 1164anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1

1263 1264first strand
Strand 2

1457 1458anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1

1654 1655first strand
Strand 2

1658 1660anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1

1677 1678first strand
Strand 2

1682 1683anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il