Analysis of interatomic Contacts of Structural Units in PDB entry:
2DZH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2DZH entry

There is 1 chain in PDB entry 2DZH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue

 ARG 11ALA 324
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 2DZH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
18 32Right-handed alpha
Helix 2
2
42 45Right-handed 310
Helix 3
3
46 51Right-handed alpha
Helix 4
4
64 79Right-handed alpha
Helix 5
5
138 154Right-handed alpha
Helix 6
6
164 169Right-handed alpha
Helix 7
7
179 181Right-handed 310
Helix 8
8
182 187Right-handed alpha
Helix 9
9
246 261Right-handed alpha
Helix 10
10
262 267Right-handed 310
Helix 11
11
305 324Right-handed alpha
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There are 3 sheets in PDB entry 2DZH. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1

156 159first strand
Strand 2

36 39parallel
Strand 3

12 15parallel
Strand 4

174 177parallel
Strand 5

294 300parallel
Strand 6

284 290anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1

112 116first strand
Strand 2

128 137anti-parallel
Strand 3

88 97anti-parallel
Strand 4

210 214parallel
Strand 5

222 225anti-parallel
Strand 6

230 233anti-parallel
Strand 7

193 203anti-parallel
Strand 8

237 238anti-parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1

112 116first strand
Strand 2

128 137anti-parallel
Strand 3

88 97anti-parallel
Strand 4

210 214parallel
Strand 5

222 225anti-parallel
Strand 6

230 233anti-parallel
Strand 7

193 203anti-parallel
Strand 8

268 279anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il