Analysis of interatomic Contacts of Structural Units in PDB entry:
2E00


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2E00 entry

There is 1 chain in PDB entry 2E00 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE -3ALA 453
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 2E00. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
-3 4Right-handed alpha
Helix 2
2
A
6 19Right-handed alpha
Helix 3
3
A
20 31Right-handed alpha
Helix 4
4
A
34 40Right-handed alpha
Helix 5
5
A
41 49Right-handed alpha
Helix 6
6
A
72 90Right-handed alpha
Helix 7
7
A
98 121Right-handed alpha
Helix 8
8
A
128 137Right-handed alpha
Helix 9
9
A
144 156Right-handed alpha
Helix 10
10
A
159 163Right-handed 310
Helix 11
11
A
167 172Right-handed alpha
Helix 12
12
A
173 198Right-handed alpha
Helix 13
13
A
202 224Right-handed alpha
Helix 14
14
A
252 260Right-handed alpha
Helix 15
15
A
303 317Right-handed alpha
Helix 16
16
A
344 349Right-handed 310
Helix 17
17
A
355 362Right-handed alpha
Helix 18
18
A
408 414Right-handed alpha
Helix 19
19
A
423 425Right-handed 310
Helix 20
20
A
426 435Right-handed alpha
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There are 3 sheets in PDB entry 2E00. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 56first strand
Strand 2
A
369 378anti-parallel
Strand 3
A
385 391anti-parallel
Strand 4
A
403 407anti-parallel
Strand 5
A
337 338parallel
Strand 6
A
331 332anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 56first strand
Strand 2
A
369 378anti-parallel
Strand 3
A
321 325anti-parallel
Strand 4
A
415 421anti-parallel
Strand 5
A
268 272anti-parallel
Strand 6
A
297 301parallel
Strand 7
A
282 285anti-parallel
Strand 8
A
441 443parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
235 240first strand
Strand 2
A
246 251anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il