Analysis of interatomic Contacts of Structural Units in PDB entry:
2E0A


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2E0A entry

There are 2 chains in PDB entry 2E0A (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
VAL 20TYR 386
B
VAL 20TYR 386
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 2E0A. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
21 28Right-handed alpha
Helix 2
2
A
36 43Right-handed alpha
Helix 3
3
A
49 73Right-handed alpha
Helix 4
4
A
76 81Right-handed alpha
Helix 5
5
A
82 101Right-handed alpha
Helix 6
6
A
109 128Right-handed alpha
Helix 7
7
A
129 143Right-handed alpha
Helix 8
8
A
152 181Right-handed alpha
Helix 9
9
A
200 220Right-handed alpha
Helix 10
10
A
244 267Right-handed alpha
Helix 11
11
A
299 301Right-handed 310
Helix 12
12
A
302 307Right-handed alpha
Helix 13
13
A
332 344Right-handed alpha
Helix 14
14
A
379 386Right-handed alpha
Helix 15
15
B
21 29Right-handed alpha
Helix 16
16
B
36 42Right-handed alpha
Helix 17
17
B
43 45Right-handed 310
Helix 18
18
B
49 73Right-handed alpha
Helix 19
19
B
76 81Right-handed alpha
Helix 20
20
B
82 101Right-handed alpha
Helix 21
21
B
102 105Right-handed 310
Helix 22
22
B
109 127Right-handed alpha
Helix 23
23
B
129 145Right-handed alpha
Helix 24
24
B
148 181Right-handed alpha
Helix 25
25
B
200 220Right-handed alpha
Helix 26
26
B
244 267Right-handed alpha
Helix 27
27
B
299 308Right-handed 310
Helix 28
28
B
332 344Right-handed alpha
Helix 29
29
B
379 386Right-handed alpha
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There are 4 sheets in PDB entry 2E0A. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
195 199first strand
Strand 2
A
240 243anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
225 231first strand
Strand 2
A
276 282parallel
Strand 3
A
286 293anti-parallel
Strand 4
A
357 365anti-parallel
Strand 5
A
347 353anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
195 199first strand
Strand 2
B
240 243anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
225 231first strand
Strand 2
B
276 282parallel
Strand 3
B
286 293anti-parallel
Strand 4
B
357 365anti-parallel
Strand 5
B
347 353anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il