Analysis of interatomic Contacts of Structural Units in PDB entry:
2E0F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2E0F entry

There is 1 chain in PDB entry 2E0F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue

 ASP 3GLY 301
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 6 helices in PDB entry 2E0F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
11 25Right-handed alpha
Helix 2
2
58 74Right-handed alpha
Helix 3
3
129 145Right-handed alpha
Helix 4
4
167 173Right-handed 310
Helix 5
5
231 246Right-handed alpha
Helix 6
6
286 299Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 2E0F. Click on sheet of interest to get list of strands forming it: A, B,

There are 12 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1

119 127first strand
Strand 2

83 92anti-parallel
Strand 3

198 201parallel
Strand 4

206 210anti-parallel
Strand 5

215 218anti-parallel
Strand 6

181 190anti-parallel
Strand 7

254 273anti-parallel
Strand 8

276 282anti-parallel
Strand 9

162 165parallel
Strand 10

4 8parallel
Strand 11

27 32parallel
Strand 12

147 150parallel
Back to list of sheets
Back to top of page

There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1

119 127first strand
Strand 2

83 92anti-parallel
Strand 3

198 201parallel
Strand 4

206 210anti-parallel
Strand 5

215 218anti-parallel
Strand 6

181 190anti-parallel
Strand 7

222 223anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il