Analysis of interatomic Contacts of Structural Units in PDB entry:
2E0K


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2E0K entry

There are 2 chains in PDB entry 2E0K (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ALA 245
B
 ASN 2ALA 245
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 2E0K. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 20Right-handed 310
Helix 2
2
A
21 31Right-handed alpha
Helix 3
3
A
48 55Right-handed alpha
Helix 4
4
A
60 62Right-handed 310
Helix 5
5
A
82 84Right-handed 310
Helix 6
6
A
85 95Right-handed alpha
Helix 7
7
A
113 123Right-handed alpha
Helix 8
8
A
134 143Right-handed alpha
Helix 9
9
A
162 173Right-handed alpha
Helix 10
10
A
181 185Right-handed 310
Helix 11
11
A
187 196Right-handed alpha
Helix 12
12
A
215 220Right-handed 310
Helix 13
13
A
234 238Right-handed 310
Helix 14
14
B
16 20Right-handed 310
Helix 15
15
B
21 31Right-handed alpha
Helix 16
16
B
48 55Right-handed alpha
Helix 17
17
B
56 58Right-handed 310
Helix 18
18
B
60 62Right-handed 310
Helix 19
19
B
77 95Right-handed alpha
Helix 20
20
B
113 123Right-handed alpha
Helix 21
21
B
134 143Right-handed alpha
Helix 22
22
B
163 171Right-handed alpha
Helix 23
23
B
181 185Right-handed 310
Helix 24
24
B
187 196Right-handed alpha
Helix 25
25
B
215 220Right-handed 310
Helix 26
26
B
234 239Right-handed 310
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There are 5 sheets in PDB entry 2E0K. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 47first strand
Strand 2
A
33 40anti-parallel
Strand 3
A
64 70parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 47first strand
Strand 2
A
33 40anti-parallel
Strand 3
A
99 103parallel
Strand 4
A
7 11parallel
Strand 5
A
127 130parallel
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There are 10 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
211 213first strand
Strand 2
A
199 203anti-parallel
Strand 3
A
228 232anti-parallel
Strand 4
A
176 179anti-parallel
Strand 5
A
154 158parallel
Strand 6
B
154 158anti-parallel
Strand 7
B
175 179parallel
Strand 8
B
228 232anti-parallel
Strand 9
B
199 203anti-parallel
Strand 10
B
211 213anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
46 47first strand
Strand 2
B
33 40anti-parallel
Strand 3
B
64 69parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
46 47first strand
Strand 2
B
33 40anti-parallel
Strand 3
B
99 103parallel
Strand 4
B
7 11parallel
Strand 5
B
127 130parallel
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