Analysis of interatomic Contacts of Structural Units in PDB entry:
2E11


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2E11 entry

There are 4 chains in PDB entry 2E11 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLY 265
B
 MET 1GLY 265
C
 MET 1GLY 265
D
 MET 1GLY 265
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 2E11. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 30Right-handed alpha
Helix 2
2
A
31 33Right-handed 310
Helix 3
3
A
51 57Right-handed 310
Helix 4
4
A
62 76Right-handed alpha
Helix 5
5
A
113 117Right-handed 310
Helix 6
6
A
144 148Right-handed 310
Helix 7
7
A
176 178Right-handed 310
Helix 8
8
A
179 194Right-handed alpha
Helix 9
9
A
242 253Right-handed alpha
Helix 10
10
A
254 259Right-handed 310
Helix 11
11
B
17 30Right-handed alpha
Helix 12
12
B
31 33Right-handed 310
Helix 13
13
B
51 57Right-handed 310
Helix 14
14
B
62 76Right-handed alpha
Helix 15
15
B
113 117Right-handed 310
Helix 16
16
B
144 147Right-handed 310
Helix 17
17
B
148 153Right-handed alpha
Helix 18
18
B
176 178Right-handed 310
Helix 19
19
B
179 194Right-handed alpha
Helix 20
20
B
242 253Right-handed alpha
Helix 21
21
B
254 259Right-handed 310
Helix 22
22
C
17 30Right-handed alpha
Helix 23
23
C
31 33Right-handed 310
Helix 24
24
C
51 55Right-handed 310
Helix 25
25
C
62 76Right-handed alpha
Helix 26
26
C
113 117Right-handed 310
Helix 27
27
C
144 148Right-handed 310
Helix 28
28
C
176 178Right-handed 310
Helix 29
29
C
179 194Right-handed alpha
Helix 30
30
C
242 253Right-handed alpha
Helix 31
31
C
254 259Right-handed 310
Helix 32
32
D
17 30Right-handed alpha
Helix 33
33
D
31 33Right-handed 310
Helix 34
34
D
50 55Right-handed 310
Helix 35
35
D
62 76Right-handed alpha
Helix 36
36
D
113 117Right-handed 310
Helix 37
37
D
144 148Right-handed 310
Helix 38
38
D
176 178Right-handed 310
Helix 39
39
D
179 195Right-handed alpha
Helix 40
40
D
242 253Right-handed alpha
Helix 41
41
D
254 259Right-handed 310
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There are 14 sheets in PDB entry 2E11. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 59first strand
Strand 2
A
78 87parallel
Strand 3
A
90 98anti-parallel
Strand 4
A
104 108anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 59first strand
Strand 2
A
78 87parallel
Strand 3
A
38 40parallel
Strand 4
A
4 10parallel
Strand 5
A
235 241anti-parallel
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There are 12 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
131 133first strand
Strand 2
A
136 142anti-parallel
Strand 3
A
168 173parallel
Strand 4
A
197 202parallel
Strand 5
A
212 220anti-parallel
Strand 6
A
226 231anti-parallel
Strand 7
B
226 231anti-parallel
Strand 8
B
212 220anti-parallel
Strand 9
B
197 202anti-parallel
Strand 10
B
168 173parallel
Strand 11
B
136 142parallel
Strand 12
B
131 133anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
204 206first strand
Strand 2
A
212 220anti-parallel
Strand 3
A
226 231anti-parallel
Strand 4
B
226 231anti-parallel
Strand 5
B
212 220anti-parallel
Strand 6
B
204 206anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
262 264first strand
Strand 2
C
262 264anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
58 59first strand
Strand 2
B
78 87parallel
Strand 3
B
90 98anti-parallel
Strand 4
B
104 108anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
58 59first strand
Strand 2
B
78 87parallel
Strand 3
B
38 40parallel
Strand 4
B
4 10parallel
Strand 5
B
235 241anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
262 264first strand
Strand 2
D
262 264anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
58 59first strand
Strand 2
C
78 86parallel
Strand 3
C
91 98anti-parallel
Strand 4
C
104 108anti-parallel
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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
58 59first strand
Strand 2
C
78 86parallel
Strand 3
C
38 40parallel
Strand 4
C
4 10parallel
Strand 5
C
235 241anti-parallel
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There are 12 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
131 133first strand
Strand 2
C
136 142anti-parallel
Strand 3
C
168 173parallel
Strand 4
C
197 202parallel
Strand 5
C
212 220anti-parallel
Strand 6
C
226 231anti-parallel
Strand 7
D
226 231anti-parallel
Strand 8
D
212 220anti-parallel
Strand 9
D
197 202anti-parallel
Strand 10
D
168 173parallel
Strand 11
D
136 142parallel
Strand 12
D
131 133anti-parallel
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There are 6 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
204 206first strand
Strand 2
C
212 220anti-parallel
Strand 3
C
226 231anti-parallel
Strand 4
D
226 231anti-parallel
Strand 5
D
212 220anti-parallel
Strand 6
D
204 206anti-parallel
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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
58 59first strand
Strand 2
D
78 87parallel
Strand 3
D
90 98anti-parallel
Strand 4
D
104 108anti-parallel
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There are 5 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
58 59first strand
Strand 2
D
78 87parallel
Strand 3
D
38 40parallel
Strand 4
D
4 10parallel
Strand 5
D
235 241anti-parallel
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