Analysis of interatomic Contacts of Structural Units in PDB entry:
2E1V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2E1V entry

There are 2 chains in PDB entry 2E1V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 6LEU 450
B
 ILE 6LEU 450
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 2E1V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
30 35Right-handed alpha
Helix 2
2
A
53 60Right-handed alpha
Helix 3
3
A
60 74Right-handed alpha
Helix 4
4
A
75 80Right-handed 310
Helix 5
5
A
113 117Right-handed 310
Helix 6
6
A
126 132Right-handed 310
Helix 7
7
A
170 173Right-handed 310
Helix 8
8
A
174 191Right-handed alpha
Helix 9
9
A
195 202Right-handed alpha
Helix 10
10
A
213 224Right-handed alpha
Helix 11
11
A
228 233Right-handed alpha
Helix 12
12
A
252 267Right-handed alpha
Helix 13
13
A
274 292Right-handed alpha
Helix 14
14
A
305 308Right-handed 310
Helix 15
15
A
331 333Right-handed 310
Helix 16
16
A
334 359Right-handed alpha
Helix 17
17
A
370 376Right-handed alpha
Helix 18
18
A
391 395Right-handed 310
Helix 19
19
A
409 413Right-handed 310
Helix 20
20
A
436 450Right-handed alpha
Helix 21
21
B
30 35Right-handed alpha
Helix 22
22
B
53 60Right-handed alpha
Helix 23
23
B
60 74Right-handed alpha
Helix 24
24
B
75 80Right-handed 310
Helix 25
25
B
113 117Right-handed 310
Helix 26
26
B
126 132Right-handed 310
Helix 27
27
B
170 173Right-handed 310
Helix 28
28
B
174 191Right-handed alpha
Helix 29
29
B
195 202Right-handed alpha
Helix 30
30
B
213 224Right-handed alpha
Helix 31
31
B
228 233Right-handed alpha
Helix 32
32
B
252 267Right-handed alpha
Helix 33
33
B
274 292Right-handed alpha
Helix 34
34
B
305 308Right-handed 310
Helix 35
35
B
331 333Right-handed 310
Helix 36
36
B
334 359Right-handed alpha
Helix 37
37
B
370 376Right-handed alpha
Helix 38
38
B
391 395Right-handed 310
Helix 39
39
B
409 413Right-handed 310
Helix 40
40
B
436 450Right-handed alpha
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There are 6 sheets in PDB entry 2E1V. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 15first strand
Strand 2
A
103 110anti-parallel
Strand 3
A
150 157parallel
Strand 4
A
161 168anti-parallel
Strand 5
A
42 49anti-parallel
Strand 6
A
404 407anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
25 28first strand
Strand 2
A
94 97anti-parallel
Strand 3
A
82 85anti-parallel
Strand 4
A
145 148anti-parallel
Strand 5
A
139 140anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
123 124first strand
Strand 2
A
244 251anti-parallel
Strand 3
A
428 435anti-parallel
Strand 4
A
415 420anti-parallel
Strand 5
A
380 385parallel
Strand 6
A
295 303parallel
Strand 7
A
321 329anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
7 15first strand
Strand 2
B
103 110anti-parallel
Strand 3
B
150 157parallel
Strand 4
B
161 168anti-parallel
Strand 5
B
42 49anti-parallel
Strand 6
B
404 407anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
25 28first strand
Strand 2
B
94 97anti-parallel
Strand 3
B
82 85anti-parallel
Strand 4
B
145 148anti-parallel
Strand 5
B
139 140anti-parallel
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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
123 124first strand
Strand 2
B
244 251anti-parallel
Strand 3
B
428 435anti-parallel
Strand 4
B
415 420anti-parallel
Strand 5
B
380 385parallel
Strand 6
B
295 303parallel
Strand 7
B
321 329anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il