Analysis of interatomic Contacts of Structural Units in PDB entry:
2E52


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2E52 entry

There are 10 chains in PDB entry 2E52 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 1LEU 299
C
 LYS 1LEU 299
B
 LYS 2LEU 299
D
 LYS 2LEU 299
E
 G 1 C 12
F
 G 1 C 12
G
 G 1 C 12
H
 G 1 C 12
I
 G 1 C 12
J
 G 1 C 12
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 63 helices in PDB entry 2E52. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 14Right-handed alpha
Helix 2
2
A
20 32Right-handed alpha
Helix 3
3
A
36 46Right-handed alpha
Helix 4
4
A
58 77Right-handed alpha
Helix 5
5
A
121 124Right-handed alpha
Helix 6
6
A
126 132Right-handed alpha
Helix 7
7
A
145 148Right-handed 310
Helix 8
8
A
154 162Right-handed alpha
Helix 9
9
A
169 177Right-handed alpha
Helix 10
10
A
189 199Right-handed alpha
Helix 11
11
A
204 206Right-handed 310
Helix 12
12
A
212 223Right-handed alpha
Helix 13
13
A
227 260Right-handed alpha
Helix 14
14
A
264 274Right-handed alpha
Helix 15
15
A
277 292Right-handed alpha
Helix 16
16
A
294 297Right-handed 310
Helix 17
17
C
4 14Right-handed alpha
Helix 18
18
C
20 32Right-handed alpha
Helix 19
19
C
36 46Right-handed alpha
Helix 20
20
C
58 77Right-handed alpha
Helix 21
21
C
121 124Right-handed alpha
Helix 22
22
C
126 132Right-handed alpha
Helix 23
23
C
145 147Right-handed 310
Helix 24
24
C
154 162Right-handed alpha
Helix 25
25
C
169 177Right-handed alpha
Helix 26
26
C
189 199Right-handed alpha
Helix 27
27
C
204 206Right-handed 310
Helix 28
28
C
212 223Right-handed alpha
Helix 29
29
C
227 260Right-handed alpha
Helix 30
30
C
264 275Right-handed alpha
Helix 31
31
C
277 291Right-handed alpha
Helix 32
32
C
294 297Right-handed 310
Helix 33
33
B
4 13Right-handed alpha
Helix 34
34
B
20 33Right-handed alpha
Helix 35
35
B
36 45Right-handed alpha
Helix 36
36
B
58 77Right-handed alpha
Helix 37
37
B
121 124Right-handed alpha
Helix 38
38
B
126 132Right-handed alpha
Helix 39
39
B
145 147Right-handed 310
Helix 40
40
B
154 162Right-handed alpha
Helix 41
41
B
169 177Right-handed alpha
Helix 42
42
B
189 200Right-handed alpha
Helix 43
43
B
212 223Right-handed alpha
Helix 44
44
B
227 260Right-handed alpha
Helix 45
45
B
264 275Right-handed alpha
Helix 46
46
B
277 291Right-handed alpha
Helix 47
47
B
294 297Right-handed 310
Helix 48
48
D
4 14Right-handed alpha
Helix 49
49
D
20 32Right-handed alpha
Helix 50
50
D
36 45Right-handed alpha
Helix 51
51
D
58 77Right-handed alpha
Helix 52
52
D
121 124Right-handed alpha
Helix 53
53
D
126 132Right-handed alpha
Helix 54
54
D
145 147Right-handed 310
Helix 55
55
D
154 162Right-handed alpha
Helix 56
56
D
169 177Right-handed alpha
Helix 57
57
D
189 199Right-handed alpha
Helix 58
58
D
204 206Right-handed 310
Helix 59
59
D
212 223Right-handed alpha
Helix 60
60
D
227 260Right-handed alpha
Helix 61
61
D
266 275Right-handed alpha
Helix 62
62
D
277 291Right-handed alpha
Helix 63
63
D
294 297Right-handed 310
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There are 8 sheets in PDB entry 2E52. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 49first strand
Strand 2
A
112 113parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
80 84first strand
Strand 2
A
94 98anti-parallel
Strand 3
A
104 109anti-parallel
Strand 4
A
138 143parallel
Strand 5
A
164 168parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
48 49first strand
Strand 2
C
112 113parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
80 84first strand
Strand 2
C
94 98anti-parallel
Strand 3
C
104 109anti-parallel
Strand 4
C
138 143parallel
Strand 5
C
164 168parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
48 49first strand
Strand 2
B
112 113parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
80 84first strand
Strand 2
B
94 98anti-parallel
Strand 3
B
104 109anti-parallel
Strand 4
B
138 143parallel
Strand 5
B
165 168parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
48 49first strand
Strand 2
D
112 113parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
80 84first strand
Strand 2
D
94 98anti-parallel
Strand 3
D
104 109anti-parallel
Strand 4
D
138 143parallel
Strand 5
D
165 168parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il