Analysis of interatomic Contacts of Structural Units in PDB entry:
2E6B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2E6B entry

There are 4 chains in PDB entry 2E6B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ALA 242
B
 MET 1LEU 241
C
 MET 1GLN 238
D
 MET 1LEU 237
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 2E6B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 24Right-handed alpha
Helix 2
2
A
73 85Right-handed alpha
Helix 3
3
A
101 107Right-handed 310
Helix 4
4
A
108 120Right-handed alpha
Helix 5
5
A
137 153Right-handed alpha
Helix 6
6
A
212 219Right-handed alpha
Helix 7
7
B
13 24Right-handed alpha
Helix 8
8
B
73 86Right-handed alpha
Helix 9
9
B
101 107Right-handed 310
Helix 10
10
B
108 120Right-handed alpha
Helix 11
11
B
137 153Right-handed alpha
Helix 12
12
B
212 219Right-handed alpha
Helix 13
13
B
233 237Right-handed 310
Helix 14
14
C
13 24Right-handed alpha
Helix 15
15
C
73 85Right-handed alpha
Helix 16
16
C
101 106Right-handed 310
Helix 17
17
C
108 120Right-handed alpha
Helix 18
18
C
141 153Right-handed alpha
Helix 19
19
C
212 219Right-handed alpha
Helix 20
20
C
233 237Right-handed 310
Helix 21
21
D
13 24Right-handed alpha
Helix 22
22
D
73 85Right-handed alpha
Helix 23
23
D
101 107Right-handed 310
Helix 24
24
D
108 120Right-handed alpha
Helix 25
25
D
137 153Right-handed alpha
Helix 26
26
D
212 220Right-handed alpha
Helix 27
27
D
233 237Right-handed 310
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There are 11 sheets in PDB entry 2E6B. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 55first strand
Strand 2
A
67 70anti-parallel
Strand 3
A
28 34parallel
Strand 4
A
2 6parallel
Strand 5
A
90 97parallel
Strand 6
A
123 129parallel
Strand 7
A
160 164parallel
Strand 8
A
221 226anti-parallel
Strand 9
A
171 174parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
182 183first strand
Strand 2
A
203 204anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
186 190first strand
Strand 2
A
196 200anti-parallel
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There are 9 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 55first strand
Strand 2
B
67 70anti-parallel
Strand 3
B
28 34parallel
Strand 4
B
2 6parallel
Strand 5
B
90 97parallel
Strand 6
B
123 129parallel
Strand 7
B
160 164parallel
Strand 8
B
221 226anti-parallel
Strand 9
B
171 174parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
182 183first strand
Strand 2
B
203 204anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
186 190first strand
Strand 2
B
196 200anti-parallel
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There are 9 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
53 56first strand
Strand 2
C
67 70anti-parallel
Strand 3
C
28 34parallel
Strand 4
C
2 6parallel
Strand 5
C
90 97parallel
Strand 6
C
123 129parallel
Strand 7
C
160 164parallel
Strand 8
C
222 226anti-parallel
Strand 9
C
172 174parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
182 183first strand
Strand 2
C
203 204anti-parallel
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There are 11 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
186 190first strand
Strand 2
C
196 200anti-parallel
Strand 3
D
51 55anti-parallel
Strand 4
D
67 71anti-parallel
Strand 5
D
28 34parallel
Strand 6
D
2 6parallel
Strand 7
D
90 97parallel
Strand 8
D
123 129parallel
Strand 9
D
160 164parallel
Strand 10
D
221 226anti-parallel
Strand 11
D
171 174parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
182 183first strand
Strand 2
D
203 204anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
186 190first strand
Strand 2
D
196 200anti-parallel
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