Analysis of interatomic Contacts of Structural Units in PDB entry:
2E6G

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 2E6G entry

There are 12 chains in PDB entry 2E6G (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	LEU 237
B	MET 1	LEU 237
C	MET 1	LEU 237
D	MET 1	LEU 237
E	MET 1	ASP 244
F	MET 1	GLN 238
G	MET 1	LEU 237
H	MET 1	LEU 237
I	MET 1	GLN 238
J	MET 1	LEU 237
K	MET 1	LEU 237
L	MET 1	GLN 238

There are 86 helices in PDB entry 2E6G. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	13	24	Right-handed alpha
Helix 2	2	A	73	86	Right-handed alpha
Helix 3	3	A	101	107	Right-handed 310
Helix 4	4	A	108	120	Right-handed alpha
Helix 5	5	A	137	153	Right-handed alpha
Helix 6	6	A	212	219	Right-handed alpha
Helix 7	7	A	233	237	Right-handed 310
Helix 8	8	B	13	25	Right-handed alpha
Helix 9	9	B	73	85	Right-handed alpha
Helix 10	10	B	101	107	Right-handed 310
Helix 11	11	B	108	120	Right-handed alpha
Helix 12	12	B	137	140	Right-handed 310
Helix 13	13	B	141	155	Right-handed alpha
Helix 14	14	B	212	220	Right-handed alpha
Helix 15	15	B	233	237	Right-handed 310
Helix 16	16	C	13	24	Right-handed alpha
Helix 17	17	C	25	27	Right-handed 310
Helix 18	18	C	73	85	Right-handed alpha
Helix 19	19	C	101	107	Right-handed 310
Helix 20	20	C	108	119	Right-handed alpha
Helix 21	21	C	137	140	Right-handed 310
Helix 22	22	C	141	154	Right-handed alpha
Helix 23	23	C	212	218	Right-handed alpha
Helix 24	24	D	13	24	Right-handed alpha
Helix 25	25	D	73	86	Right-handed alpha
Helix 26	26	D	101	107	Right-handed 310
Helix 27	27	D	108	119	Right-handed alpha
Helix 28	28	D	141	153	Right-handed alpha
Helix 29	29	D	212	220	Right-handed alpha
Helix 30	30	E	13	24	Right-handed alpha
Helix 31	31	E	73	86	Right-handed alpha
Helix 32	32	E	101	107	Right-handed 310
Helix 33	33	E	108	120	Right-handed alpha
Helix 34	34	E	141	153	Right-handed alpha
Helix 35	35	E	212	220	Right-handed alpha
Helix 36	36	E	233	241	Right-handed alpha
Helix 37	37	F	13	25	Right-handed alpha
Helix 38	38	F	73	86	Right-handed alpha
Helix 39	39	F	101	107	Right-handed 310
Helix 40	40	F	108	120	Right-handed alpha
Helix 41	41	F	137	153	Right-handed alpha
Helix 42	42	F	212	219	Right-handed alpha
Helix 43	43	F	233	237	Right-handed 310
Helix 44	44	G	13	25	Right-handed alpha
Helix 45	45	G	73	85	Right-handed alpha
Helix 46	46	G	102	106	Right-handed 310
Helix 47	47	G	108	120	Right-handed alpha
Helix 48	48	G	137	153	Right-handed alpha
Helix 49	49	G	212	220	Right-handed alpha
Helix 50	50	G	233	237	Right-handed 310
Helix 51	51	H	13	24	Right-handed alpha
Helix 52	52	H	73	85	Right-handed alpha
Helix 53	53	H	101	106	Right-handed 310
Helix 54	54	H	108	120	Right-handed alpha
Helix 55	55	H	137	155	Right-handed alpha
Helix 56	56	H	212	219	Right-handed alpha
Helix 57	57	H	233	237	Right-handed 310
Helix 58	58	I	13	24	Right-handed alpha
Helix 59	59	I	25	27	Right-handed 310
Helix 60	60	I	73	85	Right-handed alpha
Helix 61	61	I	101	107	Right-handed 310
Helix 62	62	I	108	120	Right-handed alpha
Helix 63	63	I	137	154	Right-handed alpha
Helix 64	64	I	212	219	Right-handed alpha
Helix 65	65	I	233	237	Right-handed 310
Helix 66	66	J	13	24	Right-handed alpha
Helix 67	67	J	73	85	Right-handed alpha
Helix 68	68	J	101	107	Right-handed 310
Helix 69	69	J	108	120	Right-handed alpha
Helix 70	70	J	141	154	Right-handed alpha
Helix 71	71	J	212	219	Right-handed alpha
Helix 72	72	J	233	237	Right-handed 310
Helix 73	73	K	13	25	Right-handed alpha
Helix 74	74	K	73	86	Right-handed alpha
Helix 75	75	K	101	107	Right-handed 310
Helix 76	76	K	108	120	Right-handed alpha
Helix 77	77	K	137	153	Right-handed alpha
Helix 78	78	K	212	219	Right-handed alpha
Helix 79	79	K	233	237	Right-handed 310
Helix 80	80	L	13	24	Right-handed alpha
Helix 81	81	L	73	86	Right-handed alpha
Helix 82	82	L	101	107	Right-handed 310
Helix 83	83	L	108	120	Right-handed alpha
Helix 84	84	L	137	153	Right-handed alpha
Helix 85	85	L	212	219	Right-handed alpha
Helix 86	86	L	233	238	Right-handed alpha

There are 25 sheets in PDB entry 2E6G. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y,

There are 11 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	172	174	first strand
Strand 2	A	222	226	parallel
Strand 3	A	160	164	anti-parallel
Strand 4	A	123	129	parallel
Strand 5	A	90	97	parallel
Strand 6	A	2	6	parallel
Strand 7	A	28	34	parallel
Strand 8	A	66	71	parallel
Strand 9	A	50	57	anti-parallel
Strand 10	B	196	200	anti-parallel
Strand 11	B	186	190	anti-parallel

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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	182	183	first strand
Strand 2	A	203	204	anti-parallel

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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	186	190	first strand
Strand 2	A	196	200	anti-parallel
Strand 3	B	49	51	anti-parallel

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There are 9 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	53	56	first strand
Strand 2	B	67	70	anti-parallel
Strand 3	B	28	33	parallel
Strand 4	B	2	6	parallel
Strand 5	B	91	97	parallel
Strand 6	B	124	129	parallel
Strand 7	B	160	164	parallel
Strand 8	B	222	226	anti-parallel
Strand 9	B	172	174	parallel

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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	182	183	first strand
Strand 2	B	203	204	anti-parallel

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There are 11 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	172	174	first strand
Strand 2	C	222	226	parallel
Strand 3	C	160	164	anti-parallel
Strand 4	C	123	129	parallel
Strand 5	C	90	97	parallel
Strand 6	C	2	6	parallel
Strand 7	C	28	34	parallel
Strand 8	C	67	71	parallel
Strand 9	C	49	56	anti-parallel
Strand 10	D	196	204	anti-parallel
Strand 11	D	182	190	anti-parallel

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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	182	190	first strand
Strand 2	C	196	204	anti-parallel
Strand 3	D	49	51	anti-parallel

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There are 9 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	53	55	first strand
Strand 2	D	67	70	anti-parallel
Strand 3	D	28	34	parallel
Strand 4	D	2	6	parallel
Strand 5	D	90	97	parallel
Strand 6	D	123	129	parallel
Strand 7	D	160	164	parallel
Strand 8	D	222	226	anti-parallel
Strand 9	D	172	174	parallel

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There are 11 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	171	174	first strand
Strand 2	E	221	226	parallel
Strand 3	E	160	164	anti-parallel
Strand 4	E	123	129	parallel
Strand 5	E	90	97	parallel
Strand 6	E	2	6	parallel
Strand 7	E	28	34	parallel
Strand 8	E	66	71	parallel
Strand 9	E	49	57	anti-parallel
Strand 10	F	196	200	anti-parallel
Strand 11	F	186	190	anti-parallel

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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	182	183	first strand
Strand 2	E	203	204	anti-parallel

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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	186	190	first strand
Strand 2	E	196	200	anti-parallel
Strand 3	F	49	51	anti-parallel

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There are 9 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	53	55	first strand
Strand 2	F	67	70	anti-parallel
Strand 3	F	28	34	parallel
Strand 4	F	2	6	parallel
Strand 5	F	90	97	parallel
Strand 6	F	123	129	parallel
Strand 7	F	160	164	parallel
Strand 8	F	222	226	anti-parallel
Strand 9	F	172	174	parallel

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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	182	183	first strand
Strand 2	F	203	204	anti-parallel

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There are 10 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	223	226	first strand
Strand 2	G	160	164	anti-parallel
Strand 3	G	123	129	parallel
Strand 4	G	90	97	parallel
Strand 5	G	2	6	parallel
Strand 6	G	28	34	parallel
Strand 7	G	67	71	parallel
Strand 8	G	49	55	anti-parallel
Strand 9	H	196	200	anti-parallel
Strand 10	H	186	190	anti-parallel

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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	182	183	first strand
Strand 2	G	203	204	anti-parallel

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There are 5 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	186	190	first strand
Strand 2	G	196	200	anti-parallel
Strand 3	H	49	56	anti-parallel
Strand 4	H	67	71	anti-parallel
Strand 5	H	33	34	parallel

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There are 6 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	28	31	first strand
Strand 2	H	2	6	parallel
Strand 3	H	90	97	parallel
Strand 4	H	123	129	parallel
Strand 5	H	160	164	parallel
Strand 6	H	223	226	anti-parallel

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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	182	183	first strand
Strand 2	H	203	204	anti-parallel

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There are 11 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	171	174	first strand
Strand 2	I	221	226	parallel
Strand 3	I	160	164	anti-parallel
Strand 4	I	123	129	parallel
Strand 5	I	90	97	parallel
Strand 6	I	2	6	parallel
Strand 7	I	28	34	parallel
Strand 8	I	67	71	parallel
Strand 9	I	49	55	anti-parallel
Strand 10	J	196	200	anti-parallel
Strand 11	J	186	190	anti-parallel

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There are 2 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	182	183	first strand
Strand 2	I	203	204	anti-parallel

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There are 11 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	186	190	first strand
Strand 2	I	196	200	anti-parallel
Strand 3	J	49	55	anti-parallel
Strand 4	J	67	71	anti-parallel
Strand 5	J	28	34	parallel
Strand 6	J	2	6	parallel
Strand 7	J	90	97	parallel
Strand 8	J	123	129	parallel
Strand 9	J	160	164	parallel
Strand 10	J	222	226	anti-parallel
Strand 11	J	172	174	parallel

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There are 2 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	182	183	first strand
Strand 2	J	203	204	anti-parallel

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There are 11 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	171	174	first strand
Strand 2	K	221	226	parallel
Strand 3	K	160	164	anti-parallel
Strand 4	K	123	129	parallel
Strand 5	K	90	97	parallel
Strand 6	K	2	6	parallel
Strand 7	K	28	34	parallel
Strand 8	K	67	71	parallel
Strand 9	K	49	55	anti-parallel
Strand 10	L	196	204	anti-parallel
Strand 11	L	182	190	anti-parallel

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There are 3 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	182	190	first strand
Strand 2	K	196	204	anti-parallel
Strand 3	L	49	51	anti-parallel

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There are 9 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	53	56	first strand
Strand 2	L	67	70	anti-parallel
Strand 3	L	28	34	parallel
Strand 4	L	2	6	parallel
Strand 5	L	90	97	parallel
Strand 6	L	123	129	parallel
Strand 7	L	160	164	parallel
Strand 8	L	221	226	anti-parallel
Strand 9	L	171	174	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 2E6G

Analysis of interatomic Contacts of Structural Units in PDB entry:
2E6G