Analysis of interatomic Contacts of Structural Units in PDB entry:
2E6Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2E6Y entry

There are 2 chains in PDB entry 2E6Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 11LEU 225
B
 VAL 1011LEU 1225
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 2E6Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 13Right-handed 310
Helix 2
2
A
23 35Right-handed alpha
Helix 3
3
A
36 38Right-handed 310
Helix 4
4
A
45 52Right-handed alpha
Helix 5
5
A
53 64Right-handed alpha
Helix 6
6
A
76 90Right-handed alpha
Helix 7
7
A
102 117Right-handed alpha
Helix 8
8
A
128 133Right-handed 310
Helix 9
9
A
134 150Right-handed alpha
Helix 10
10
A
160 172Right-handed alpha
Helix 11
11
A
188 193Right-handed alpha
Helix 12
12
A
202 207Right-handed alpha
Helix 13
13
A
210 224Right-handed alpha
Helix 14
14
B
1011 1013Right-handed 310
Helix 15
15
B
1023 1035Right-handed alpha
Helix 16
16
B
1036 1038Right-handed 310
Helix 17
17
B
1045 1052Right-handed alpha
Helix 18
18
B
1053 1064Right-handed alpha
Helix 19
19
B
1076 1090Right-handed alpha
Helix 20
20
B
1102 1117Right-handed alpha
Helix 21
21
B
1128 1133Right-handed 310
Helix 22
22
B
1134 1150Right-handed alpha
Helix 23
23
B
1160 1172Right-handed alpha
Helix 24
24
B
1188 1193Right-handed alpha
Helix 25
25
B
1202 1207Right-handed alpha
Helix 26
26
B
1210 1225Right-handed alpha
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There are 2 sheets in PDB entry 2E6Y. Click on sheet of interest to get list of strands forming it: A, B,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 19first strand
Strand 2
A
40 44parallel
Strand 3
A
66 73parallel
Strand 4
A
94 98parallel
Strand 5
A
119 123parallel
Strand 6
A
153 155parallel
Strand 7
A
176 179parallel
Strand 8
A
198 201parallel
Strand 9
A
15 19parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1015 1019first strand
Strand 2
B
1040 1044parallel
Strand 3
B
1066 1073parallel
Strand 4
B
1094 1098parallel
Strand 5
B
1119 1123parallel
Strand 6
B
1153 1155parallel
Strand 7
B
1176 1179parallel
Strand 8
B
1198 1201parallel
Strand 9
B
1015 1019parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il