Analysis of interatomic Contacts of Structural Units in PDB entry:
2E77


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2E77 entry

There are 4 chains in PDB entry 2E77 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 8TYR 374
B
 GLU 1007TYR 1374
C
 GLU 2007TYR 2374
D
 GLU 3007TYR 3374
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 66 helices in PDB entry 2E77. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
24 31Right-handed alpha
Helix 2
2
A
34 43Right-handed alpha
Helix 3
3
A
48 57Right-handed alpha
Helix 4
4
A
96 100Right-handed 310
Helix 5
5
A
103 116Right-handed alpha
Helix 6
6
A
128 137Right-handed alpha
Helix 7
7
A
150 165Right-handed alpha
Helix 8
8
A
181 188Right-handed alpha
Helix 9
9
A
223 234Right-handed alpha
Helix 10
10
A
245 255Right-handed alpha
Helix 11
11
A
264 268Right-handed 310
Helix 12
12
A
275 288Right-handed alpha
Helix 13
13
A
301 311Right-handed alpha
Helix 14
14
A
319 353Right-handed alpha
Helix 15
15
A
356 361Right-handed alpha
Helix 16
16
B
1024 1031Right-handed alpha
Helix 17
17
B
1034 1043Right-handed alpha
Helix 18
18
B
1048 1057Right-handed alpha
Helix 19
19
B
1096 1100Right-handed 310
Helix 20
20
B
1103 1116Right-handed alpha
Helix 21
21
B
1128 1137Right-handed alpha
Helix 22
22
B
1150 1165Right-handed alpha
Helix 23
23
B
1181 1187Right-handed alpha
Helix 24
24
B
1198 1202Right-handed 310
Helix 25
25
B
1205 1209Right-handed 310
Helix 26
26
B
1210 1218Right-handed alpha
Helix 27
27
B
1223 1235Right-handed alpha
Helix 28
28
B
1245 1255Right-handed alpha
Helix 29
29
B
1264 1268Right-handed 310
Helix 30
30
B
1275 1288Right-handed alpha
Helix 31
31
B
1301 1311Right-handed alpha
Helix 32
32
B
1319 1353Right-handed alpha
Helix 33
33
B
1356 1361Right-handed alpha
Helix 34
34
C
2023 2031Right-handed alpha
Helix 35
35
C
2034 2043Right-handed alpha
Helix 36
36
C
2048 2057Right-handed alpha
Helix 37
37
C
2096 2100Right-handed 310
Helix 38
38
C
2103 2116Right-handed alpha
Helix 39
39
C
2128 2137Right-handed alpha
Helix 40
40
C
2150 2164Right-handed alpha
Helix 41
41
C
2181 2187Right-handed alpha
Helix 42
42
C
2223 2234Right-handed alpha
Helix 43
43
C
2245 2255Right-handed alpha
Helix 44
44
C
2264 2268Right-handed 310
Helix 45
45
C
2275 2288Right-handed alpha
Helix 46
46
C
2301 2311Right-handed alpha
Helix 47
47
C
2319 2330Right-handed alpha
Helix 48
48
C
2330 2353Right-handed alpha
Helix 49
49
C
2356 2362Right-handed alpha
Helix 50
50
D
3024 3031Right-handed alpha
Helix 51
51
D
3034 3043Right-handed alpha
Helix 52
52
D
3048 3057Right-handed alpha
Helix 53
53
D
3096 3100Right-handed 310
Helix 54
54
D
3103 3116Right-handed alpha
Helix 55
55
D
3128 3137Right-handed alpha
Helix 56
56
D
3150 3165Right-handed alpha
Helix 57
57
D
3181 3188Right-handed alpha
Helix 58
58
D
3198 3202Right-handed 310
Helix 59
59
D
3210 3215Right-handed alpha
Helix 60
60
D
3223 3235Right-handed alpha
Helix 61
61
D
3245 3255Right-handed alpha
Helix 62
62
D
3264 3268Right-handed 310
Helix 63
63
D
3275 3288Right-handed alpha
Helix 64
64
D
3301 3311Right-handed alpha
Helix 65
65
D
3319 3353Right-handed alpha
Helix 66
66
D
3356 3362Right-handed alpha
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There are 12 sheets in PDB entry 2E77. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 63first strand
Strand 2
A
365 367anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 80first strand
Strand 2
A
83 85anti-parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
89 91first strand
Strand 2
A
315 318parallel
Strand 3
A
293 295parallel
Strand 4
A
259 262parallel
Strand 5
A
238 243parallel
Strand 6
A
166 172parallel
Strand 7
A
141 145parallel
Strand 8
A
119 122parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1061 1063first strand
Strand 2
B
1365 1367anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1078 1080first strand
Strand 2
B
1083 1085anti-parallel
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There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1089 1091first strand
Strand 2
B
1315 1318parallel
Strand 3
B
1293 1295parallel
Strand 4
B
1259 1262parallel
Strand 5
B
1238 1243parallel
Strand 6
B
1169 1172parallel
Strand 7
B
1141 1145parallel
Strand 8
B
1119 1122parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
2061 2063first strand
Strand 2
C
2365 2367anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
2078 2080first strand
Strand 2
C
2083 2085anti-parallel
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There are 8 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
2089 2091first strand
Strand 2
C
2315 2318parallel
Strand 3
C
2293 2295parallel
Strand 4
C
2259 2262parallel
Strand 5
C
2238 2243parallel
Strand 6
C
2169 2172parallel
Strand 7
C
2141 2145parallel
Strand 8
C
2119 2122parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
3061 3063first strand
Strand 2
D
3365 3367anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
3078 3080first strand
Strand 2
D
3083 3085anti-parallel
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There are 9 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
3089 3091first strand
Strand 2
D
3119 3122parallel
Strand 3
D
3141 3145parallel
Strand 4
D
3169 3172parallel
Strand 5
D
3238 3243parallel
Strand 6
D
3259 3262parallel
Strand 7
D
3293 3295parallel
Strand 8
D
3315 3318parallel
Strand 9
D
3089 3091parallel
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