Analysis of interatomic Contacts of Structural Units in PDB entry:
2E7J


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2E7J entry

There are 2 chains in PDB entry 2E7J (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 8SER 371
B
 ASP 8SER 371
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 2E7J. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 18Right-handed alpha
Helix 2
2
A
22 32Right-handed alpha
Helix 3
3
A
54 61Right-handed alpha
Helix 4
4
A
61 67Right-handed alpha
Helix 5
5
A
77 90Right-handed alpha
Helix 6
6
A
103 113Right-handed alpha
Helix 7
7
A
131 143Right-handed alpha
Helix 8
8
A
165 175Right-handed alpha
Helix 9
9
A
194 199Right-handed alpha
Helix 10
10
A
207 211Right-handed alpha
Helix 11
11
A
241 245Right-handed 310
Helix 12
12
A
251 268Right-handed alpha
Helix 13
13
A
270 288Right-handed alpha
Helix 14
14
A
307 317Right-handed alpha
Helix 15
15
A
319 321Right-handed 310
Helix 16
16
A
322 331Right-handed alpha
Helix 17
17
A
352 370Right-handed alpha
Helix 18
18
B
22 32Right-handed alpha
Helix 19
19
B
54 61Right-handed alpha
Helix 20
20
B
61 68Right-handed alpha
Helix 21
21
B
77 90Right-handed alpha
Helix 22
22
B
103 113Right-handed alpha
Helix 23
23
B
131 143Right-handed alpha
Helix 24
24
B
165 176Right-handed alpha
Helix 25
25
B
194 199Right-handed alpha
Helix 26
26
B
207 211Right-handed alpha
Helix 27
27
B
223 231Right-handed alpha
Helix 28
28
B
251 268Right-handed alpha
Helix 29
29
B
270 288Right-handed alpha
Helix 30
30
B
307 314Right-handed alpha
Helix 31
31
B
319 321Right-handed 310
Helix 32
32
B
322 331Right-handed alpha
Helix 33
33
B
352 370Right-handed alpha
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There are 6 sheets in PDB entry 2E7J. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 11first strand
Strand 2
A
333 334parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
71 75first strand
Strand 2
A
218 222anti-parallel
Strand 3
A
202 206anti-parallel
Strand 4
A
180 183parallel
Strand 5
A
148 154parallel
Strand 6
A
95 99parallel
Strand 7
A
116 120parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
291 293first strand
Strand 2
A
302 306anti-parallel
Strand 3
A
343 347anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 11first strand
Strand 2
B
333 334parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
71 75first strand
Strand 2
B
218 222anti-parallel
Strand 3
B
202 206anti-parallel
Strand 4
B
180 183parallel
Strand 5
B
148 154parallel
Strand 6
B
95 99parallel
Strand 7
B
116 120parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
291 292first strand
Strand 2
B
302 306anti-parallel
Strand 3
B
343 347anti-parallel
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