Analysis of interatomic Contacts of Structural Units in PDB entry:
2E87


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2E87 entry

There is 1 chain in PDB entry 2E87 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1TYR 356
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 2E87. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 31Right-handed alpha
Helix 2
2
A
37 68Right-handed alpha
Helix 3
3
A
70 74Right-handed 310
Helix 4
4
A
75 87Right-handed alpha
Helix 5
5
A
87 118Right-handed alpha
Helix 6
6
A
121 143Right-handed alpha
Helix 7
7
A
143 157Right-handed alpha
Helix 8
8
A
158 160Right-handed 310
Helix 9
9
A
179 188Right-handed alpha
Helix 10
10
A
233 242Right-handed alpha
Helix 11
11
A
243 246Right-handed 310
Helix 12
12
A
263 278Right-handed alpha
Helix 13
13
A
294 308Right-handed alpha
Helix 14
14
A
322 351Right-handed alpha
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There is 1 sheet ( A) in PDB entry 2E87.

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
193 195first strand
Strand 2
A
204 211anti-parallel
Strand 3
A
214 220anti-parallel
Strand 4
A
169 173parallel
Strand 5
A
249 254parallel
Strand 6
A
283 287parallel
Strand 7
A
313 314parallel
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