Analysis of interatomic Contacts of Structural Units in PDB entry:
2E8V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2E8V entry

There are 2 chains in PDB entry 2E8V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 5ASP 307
B
 MET 6ASP 307
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 2E8V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 15Right-handed alpha
Helix 2
2
A
21 37Right-handed alpha
Helix 3
3
A
42 56Right-handed alpha
Helix 4
4
A
58 84Right-handed alpha
Helix 5
5
A
94 99Right-handed alpha
Helix 6
6
A
100 119Right-handed alpha
Helix 7
7
A
120 123Right-handed 310
Helix 8
8
A
125 156Right-handed alpha
Helix 9
9
A
163 175Right-handed alpha
Helix 10
10
A
175 190Right-handed alpha
Helix 11
11
A
199 221Right-handed alpha
Helix 12
12
A
231 236Right-handed alpha
Helix 13
13
A
240 253Right-handed alpha
Helix 14
14
A
255 269Right-handed alpha
Helix 15
15
A
272 286Right-handed alpha
Helix 16
16
A
288 306Right-handed alpha
Helix 17
17
B
6 15Right-handed alpha
Helix 18
18
B
21 36Right-handed alpha
Helix 19
19
B
42 56Right-handed alpha
Helix 20
20
B
58 85Right-handed alpha
Helix 21
21
B
94 100Right-handed alpha
Helix 22
22
B
100 120Right-handed alpha
Helix 23
23
B
125 156Right-handed alpha
Helix 24
24
B
163 175Right-handed alpha
Helix 25
25
B
175 190Right-handed alpha
Helix 26
26
B
199 219Right-handed alpha
Helix 27
27
B
231 236Right-handed alpha
Helix 28
28
B
240 253Right-handed alpha
Helix 29
29
B
255 269Right-handed alpha
Helix 30
30
B
272 286Right-handed alpha
Helix 31
31
B
288 306Right-handed alpha
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There are 2 sheets in PDB entry 2E8V. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
88 89first strand
Strand 2
A
92 93anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
88 89first strand
Strand 2
B
92 93anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il