Analysis of interatomic Contacts of Structural Units in PDB entry:
2EAE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2EAE entry

There is 1 chain in PDB entry 2EAE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 12SER 898
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 26 helices in PDB entry 2EAE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
24 28Right-handed 310
Helix 2
2
A
40 50Right-handed alpha
Helix 3
3
A
94 99Right-handed alpha
Helix 4
4
A
101 113Right-handed alpha
Helix 5
5
A
128 133Right-handed alpha
Helix 6
6
A
251 253Right-handed 310
Helix 7
7
A
295 314Right-handed alpha
Helix 8
8
A
314 331Right-handed alpha
Helix 9
9
A
349 360Right-handed alpha
Helix 10
10
A
363 386Right-handed alpha
Helix 11
11
A
412 417Right-handed 310
Helix 12
12
A
422 428Right-handed alpha
Helix 13
13
A
436 439Right-handed 310
Helix 14
14
A
440 463Right-handed alpha
Helix 15
15
A
497 502Right-handed alpha
Helix 16
16
A
505 522Right-handed alpha
Helix 17
17
A
523 545Right-handed alpha
Helix 18
18
A
575 596Right-handed alpha
Helix 19
19
A
610 615Right-handed 310
Helix 20
20
A
630 638Right-handed alpha
Helix 21
21
A
679 683Right-handed 310
Helix 22
22
A
698 710Right-handed alpha
Helix 23
23
A
720 734Right-handed alpha
Helix 24
24
A
736 751Right-handed alpha
Helix 25
25
A
765 779Right-handed alpha
Helix 26
26
A
854 856Right-handed 310
Back to top of page

There are 9 sheets in PDB entry 2EAE. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
18 21first strand
Strand 2
A
153 160anti-parallel
Strand 3
A
165 171anti-parallel
Strand 4
A
176 184anti-parallel
Strand 5
A
189 196anti-parallel
Strand 6
A
272 281anti-parallel
Strand 7
A
240 249anti-parallel
Strand 8
A
227 234anti-parallel
Strand 9
A
216 223anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 54first strand
Strand 2
A
58 62anti-parallel
Strand 3
A
68 75anti-parallel
Strand 4
A
139 144anti-parallel
Strand 5
A
202 207anti-parallel
Strand 6
A
265 270anti-parallel
Strand 7
A
255 258anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
334 336first strand
Strand 2
A
811 818anti-parallel
Strand 3
A
822 829anti-parallel
Strand 4
A
832 840anti-parallel
Strand 5
A
889 895anti-parallel
Strand 6
A
858 862anti-parallel
Strand 7
A
865 866anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
418 419first strand
Strand 2
A
485 486anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
547 548first strand
Strand 2
A
557 558anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
561 564first strand
Strand 2
A
567 573anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
711 712first strand
Strand 2
A
715 716anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
780 781first strand
Strand 2
A
798 800anti-parallel
Strand 3
A
846 850parallel
Strand 4
A
879 883anti-parallel
Strand 5
A
870 873anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
785 787first strand
Strand 2
A
793 795anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il