Analysis of interatomic Contacts of Structural Units in PDB entry:
2EBA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2EBA entry

There are 8 chains in PDB entry 2EBA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1PHE 385
C
 MET 1PHE 385
D
 MET 1PHE 385
E
 MET 1PHE 385
F
 MET 1PHE 385
G
 MET 1PHE 385
H
 MET 1PHE 385
I
 MET 1PHE 385
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are136 helices in PDB entry 2EBA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 11Right-handed 310
Helix 2
2
A
12 30Right-handed alpha
Helix 3
3
A
30 40Right-handed alpha
Helix 4
4
A
44 46Right-handed 310
Helix 5
5
A
47 55Right-handed alpha
Helix 6
6
A
62 66Right-handed 310
Helix 7
7
A
71 86Right-handed alpha
Helix 8
8
A
86 99Right-handed alpha
Helix 9
9
A
100 108Right-handed alpha
Helix 10
10
A
109 122Right-handed alpha
Helix 11
11
A
225 227Right-handed 310
Helix 12
12
A
234 270Right-handed alpha
Helix 13
13
A
276 279Right-handed 310
Helix 14
14
A
280 310Right-handed alpha
Helix 15
15
A
314 341Right-handed alpha
Helix 16
16
A
342 346Right-handed 310
Helix 17
17
A
350 362Right-handed alpha
Helix 18
18
A
367 381Right-handed alpha
Helix 19
19
C
6 11Right-handed 310
Helix 20
20
C
12 30Right-handed alpha
Helix 21
21
C
30 40Right-handed alpha
Helix 22
22
C
46 55Right-handed alpha
Helix 23
23
C
62 66Right-handed 310
Helix 24
24
C
71 86Right-handed alpha
Helix 25
25
C
86 99Right-handed alpha
Helix 26
26
C
100 108Right-handed alpha
Helix 27
27
C
109 122Right-handed alpha
Helix 28
28
C
225 227Right-handed 310
Helix 29
29
C
234 270Right-handed alpha
Helix 30
30
C
276 279Right-handed 310
Helix 31
31
C
280 310Right-handed alpha
Helix 32
32
C
314 341Right-handed alpha
Helix 33
33
C
342 346Right-handed 310
Helix 34
34
C
350 364Right-handed alpha
Helix 35
35
C
367 381Right-handed alpha
Helix 36
36
D
6 11Right-handed 310
Helix 37
37
D
12 30Right-handed alpha
Helix 38
38
D
33 40Right-handed alpha
Helix 39
39
D
44 46Right-handed 310
Helix 40
40
D
47 55Right-handed alpha
Helix 41
41
D
62 66Right-handed 310
Helix 42
42
D
71 86Right-handed alpha
Helix 43
43
D
86 99Right-handed alpha
Helix 44
44
D
100 108Right-handed alpha
Helix 45
45
D
109 122Right-handed alpha
Helix 46
46
D
234 270Right-handed alpha
Helix 47
47
D
276 279Right-handed 310
Helix 48
48
D
280 310Right-handed alpha
Helix 49
49
D
314 341Right-handed alpha
Helix 50
50
D
342 346Right-handed 310
Helix 51
51
D
350 362Right-handed alpha
Helix 52
52
D
367 381Right-handed alpha
Helix 53
53
E
6 11Right-handed 310
Helix 54
54
E
12 30Right-handed alpha
Helix 55
55
E
30 40Right-handed alpha
Helix 56
56
E
46 55Right-handed alpha
Helix 57
57
E
62 66Right-handed 310
Helix 58
58
E
71 86Right-handed alpha
Helix 59
59
E
86 99Right-handed alpha
Helix 60
60
E
100 108Right-handed alpha
Helix 61
61
E
109 122Right-handed alpha
Helix 62
62
E
225 227Right-handed 310
Helix 63
63
E
234 270Right-handed alpha
Helix 64
64
E
276 279Right-handed 310
Helix 65
65
E
280 310Right-handed alpha
Helix 66
66
E
314 341Right-handed alpha
Helix 67
67
E
342 346Right-handed 310
Helix 68
68
E
350 364Right-handed alpha
Helix 69
69
E
367 381Right-handed alpha
Helix 70
70
F
6 11Right-handed 310
Helix 71
71
F
12 30Right-handed alpha
Helix 72
72
F
33 41Right-handed alpha
Helix 73
73
F
44 46Right-handed 310
Helix 74
74
F
47 55Right-handed alpha
Helix 75
75
F
62 66Right-handed 310
Helix 76
76
F
71 86Right-handed alpha
Helix 77
77
F
86 99Right-handed alpha
Helix 78
78
F
100 108Right-handed alpha
Helix 79
79
F
109 122Right-handed alpha
Helix 80
80
F
225 227Right-handed 310
Helix 81
81
F
234 270Right-handed alpha
Helix 82
82
F
276 279Right-handed 310
Helix 83
83
F
280 310Right-handed alpha
Helix 84
84
F
314 341Right-handed alpha
Helix 85
85
F
342 346Right-handed 310
Helix 86
86
F
350 362Right-handed alpha
Helix 87
87
F
367 381Right-handed alpha
Helix 88
88
G
6 11Right-handed 310
Helix 89
89
G
12 30Right-handed alpha
Helix 90
90
G
30 41Right-handed alpha
Helix 91
91
G
46 55Right-handed alpha
Helix 92
92
G
62 66Right-handed 310
Helix 93
93
G
71 86Right-handed alpha
Helix 94
94
G
86 99Right-handed alpha
Helix 95
95
G
100 108Right-handed alpha
Helix 96
96
G
109 122Right-handed alpha
Helix 97
97
G
225 227Right-handed 310
Helix 98
98
G
234 270Right-handed alpha
Helix 99
99
G
276 279Right-handed 310
Helix 100
100
G
280 310Right-handed alpha
Helix 101
101
G
314 341Right-handed alpha
Helix 102
102
G
342 346Right-handed 310
Helix 103
103
G
350 362Right-handed alpha
Helix 104
104
G
367 381Right-handed alpha
Helix 105
105
H
6 11Right-handed 310
Helix 106
106
H
12 30Right-handed alpha
Helix 107
107
H
30 40Right-handed alpha
Helix 108
108
H
46 55Right-handed alpha
Helix 109
109
H
62 66Right-handed 310
Helix 110
110
H
71 86Right-handed alpha
Helix 111
111
H
86 99Right-handed alpha
Helix 112
112
H
100 108Right-handed alpha
Helix 113
113
H
109 122Right-handed alpha
Helix 114
114
H
234 270Right-handed alpha
Helix 115
115
H
276 279Right-handed 310
Helix 116
116
H
280 310Right-handed alpha
Helix 117
117
H
314 341Right-handed alpha
Helix 118
118
H
342 346Right-handed 310
Helix 119
119
H
350 364Right-handed alpha
Helix 120
120
H
367 381Right-handed alpha
Helix 121
121
I
6 11Right-handed 310
Helix 122
122
I
12 30Right-handed alpha
Helix 123
123
I
30 40Right-handed alpha
Helix 124
124
I
46 55Right-handed alpha
Helix 125
125
I
62 66Right-handed 310
Helix 126
126
I
71 86Right-handed alpha
Helix 127
127
I
86 99Right-handed alpha
Helix 128
128
I
100 108Right-handed alpha
Helix 129
129
I
109 122Right-handed alpha
Helix 130
130
I
234 270Right-handed alpha
Helix 131
131
I
276 279Right-handed 310
Helix 132
132
I
280 310Right-handed alpha
Helix 133
133
I
314 341Right-handed alpha
Helix 134
134
I
342 346Right-handed 310
Helix 135
135
I
350 362Right-handed alpha
Helix 136
136
I
367 381Right-handed alpha
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There are 17 sheets in PDB entry 2EBA. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
127 130first strand
Strand 2
A
172 177parallel
Strand 3
A
185 190anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 149first strand
Strand 2
A
154 165anti-parallel
Strand 3
A
212 223anti-parallel
Strand 4
A
196 200anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
127 130first strand
Strand 2
C
172 177parallel
Strand 3
C
185 186anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
127 130first strand
Strand 2
C
172 177parallel
Strand 3
C
189 190anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
147 149first strand
Strand 2
C
154 165anti-parallel
Strand 3
C
212 223anti-parallel
Strand 4
C
196 200anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
127 130first strand
Strand 2
D
172 177parallel
Strand 3
D
185 190anti-parallel
Strand 4
D
227 232anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
147 149first strand
Strand 2
D
154 165anti-parallel
Strand 3
D
212 223anti-parallel
Strand 4
D
196 200anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
127 130first strand
Strand 2
E
172 177parallel
Strand 3
E
185 190anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
147 149first strand
Strand 2
E
154 165anti-parallel
Strand 3
E
212 223anti-parallel
Strand 4
E
196 200anti-parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
127 130first strand
Strand 2
F
172 177parallel
Strand 3
F
185 190anti-parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
147 149first strand
Strand 2
F
154 165anti-parallel
Strand 3
F
212 223anti-parallel
Strand 4
F
196 200anti-parallel
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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
127 130first strand
Strand 2
G
172 177parallel
Strand 3
G
185 190anti-parallel
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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
147 149first strand
Strand 2
G
154 165anti-parallel
Strand 3
G
212 223anti-parallel
Strand 4
G
196 200anti-parallel
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There are 4 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
127 130first strand
Strand 2
H
172 177parallel
Strand 3
H
185 190anti-parallel
Strand 4
H
227 232anti-parallel
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There are 4 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
147 149first strand
Strand 2
H
154 165anti-parallel
Strand 3
H
212 223anti-parallel
Strand 4
H
196 200anti-parallel
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There are 4 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
127 130first strand
Strand 2
I
172 177parallel
Strand 3
I
185 190anti-parallel
Strand 4
I
227 232anti-parallel
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There are 4 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
147 149first strand
Strand 2
I
154 165anti-parallel
Strand 3
I
212 223anti-parallel
Strand 4
I
196 200anti-parallel
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