Analysis of interatomic Contacts of Structural Units in PDB entry:
2EBH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2EBH entry

There is 1 chain in PDB entry 2EBH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
X
 LEU 575LEU 1285
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 2EBH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
X
592 601Right-handed alpha
Helix 2
2
X
608 624Right-handed alpha
Helix 3
3
X
626 648Right-handed alpha
Helix 4
4
X
653 669Right-handed alpha
Helix 5
5
X
670 672Right-handed 310
Helix 6
6
X
673 682Right-handed alpha
Helix 7
7
X
689 703Right-handed alpha
Helix 8
8
X
709 720Right-handed alpha
Helix 9
9
X
748 755Right-handed 310
Helix 10
10
X
758 766Right-handed 310
Helix 11
11
X
772 788Right-handed alpha
Helix 12
12
X
805 813Right-handed alpha
Helix 13
13
X
826 840Right-handed alpha
Helix 14
14
X
843 849Right-handed alpha
Helix 15
15
X
850 873Right-handed alpha
Helix 16
16
X
877 885Right-handed alpha
Helix 17
17
X
888 896Right-handed alpha
Helix 18
18
X
897 908Right-handed alpha
Helix 19
19
X
917 927Right-handed alpha
Helix 20
20
X
927 934Right-handed alpha
Helix 21
21
X
946 958Right-handed alpha
Helix 22
22
X
963 974Right-handed alpha
Helix 23
23
X
980 992Right-handed alpha
Helix 24
24
X
1011 1030Right-handed alpha
Helix 25
25
X
1042 1047Right-handed alpha
Helix 26
26
X
1058 1064Right-handed alpha
Helix 27
27
X
1121 1131Right-handed alpha
Helix 28
28
X
1137 1150Right-handed alpha
Helix 29
29
X
1151 1157Right-handed alpha
Helix 30
30
X
1164 1179Right-handed alpha
Helix 31
31
X
1222 1226Right-handed 310
Helix 32
32
X
1240 1251Right-handed alpha
Helix 33
33
X
1265 1270Right-handed alpha
Helix 34
34
X
1274 1278Right-handed 310
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There are 5 sheets in PDB entry 2EBH. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
744 746first strand
Strand 2
X
799 802anti-parallel
Strand 3
X
793 796anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
995 1000first strand
Strand 2
X
938 945parallel
Strand 3
X
1037 1041parallel
Strand 4
X
911 915parallel
Strand 5
X
1067 1070parallel
Strand 6
X
1076 1078anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
1049 1050first strand
Strand 2
X
1055 1056anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
1106 1107first strand
Strand 2
X
1254 1259anti-parallel
Strand 3
X
1187 1195anti-parallel
Strand 4
X
1199 1212anti-parallel
Strand 5
X
1182 1183anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
1106 1107first strand
Strand 2
X
1254 1259anti-parallel
Strand 3
X
1187 1195anti-parallel
Strand 4
X
1199 1212anti-parallel
Strand 5
X
1215 1220anti-parallel
Strand 6
X
1236 1239anti-parallel
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