Analysis of interatomic Contacts of Structural Units in PDB entry:
2EEZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 2EEZ entry

There are 6 chains in PDB entry 2EEZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	GLY 369
C	MET 1	GLY 369
D	MET 1	GLY 369
E	MET 1	GLY 369
F	MET 1	GLY 369
G	MET 1	GLY 369

There are119 helices in PDB entry 2EEZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	19	29	Right-handed alpha
Helix 2	2	A	40	44	Right-handed 310
Helix 3	3	A	46	54	Right-handed alpha
Helix 4	4	A	59	64	Right-handed alpha
Helix 5	5	A	76	83	Right-handed 310
Helix 6	6	A	94	97	Right-handed 310
Helix 7	7	A	98	109	Right-handed alpha
Helix 8	8	A	128	147	Right-handed alpha
Helix 9	9	A	148	152	Right-handed 310
Helix 10	10	A	175	188	Right-handed alpha
Helix 11	11	A	198	209	Right-handed alpha
Helix 12	12	A	219	230	Right-handed alpha
Helix 13	13	A	249	254	Right-handed alpha
Helix 14	14	A	299	302	Right-handed 310
Helix 15	15	A	303	326	Right-handed alpha
Helix 16	16	A	327	332	Right-handed alpha
Helix 17	17	A	333	338	Right-handed alpha
Helix 18	18	A	349	356	Right-handed alpha
Helix 19	19	A	362	368	Right-handed alpha
Helix 20	20	C	19	29	Right-handed alpha
Helix 21	21	C	40	44	Right-handed 310
Helix 22	22	C	46	53	Right-handed alpha
Helix 23	23	C	59	65	Right-handed alpha
Helix 24	24	C	76	83	Right-handed 310
Helix 25	25	C	94	97	Right-handed 310
Helix 26	26	C	98	109	Right-handed alpha
Helix 27	27	C	116	118	Right-handed 310
Helix 28	28	C	128	148	Right-handed alpha
Helix 29	29	C	149	152	Right-handed 310
Helix 30	30	C	175	188	Right-handed alpha
Helix 31	31	C	198	210	Right-handed alpha
Helix 32	32	C	219	229	Right-handed alpha
Helix 33	33	C	251	255	Right-handed 310
Helix 34	34	C	299	302	Right-handed 310
Helix 35	35	C	303	326	Right-handed alpha
Helix 36	36	C	327	332	Right-handed alpha
Helix 37	37	C	333	338	Right-handed alpha
Helix 38	38	C	349	357	Right-handed alpha
Helix 39	39	C	362	368	Right-handed alpha
Helix 40	40	D	19	29	Right-handed alpha
Helix 41	41	D	40	44	Right-handed 310
Helix 42	42	D	46	54	Right-handed alpha
Helix 43	43	D	59	65	Right-handed alpha
Helix 44	44	D	76	83	Right-handed 310
Helix 45	45	D	94	97	Right-handed 310
Helix 46	46	D	98	109	Right-handed alpha
Helix 47	47	D	116	118	Right-handed 310
Helix 48	48	D	128	148	Right-handed alpha
Helix 49	49	D	149	152	Right-handed 310
Helix 50	50	D	175	188	Right-handed alpha
Helix 51	51	D	198	209	Right-handed alpha
Helix 52	52	D	219	230	Right-handed alpha
Helix 53	53	D	249	254	Right-handed alpha
Helix 54	54	D	298	302	Right-handed 310
Helix 55	55	D	303	326	Right-handed alpha
Helix 56	56	D	327	332	Right-handed alpha
Helix 57	57	D	333	338	Right-handed alpha
Helix 58	58	D	349	356	Right-handed alpha
Helix 59	59	D	362	368	Right-handed alpha
Helix 60	60	E	19	28	Right-handed alpha
Helix 61	61	E	40	44	Right-handed 310
Helix 62	62	E	46	54	Right-handed alpha
Helix 63	63	E	59	64	Right-handed alpha
Helix 64	64	E	76	83	Right-handed 310
Helix 65	65	E	94	97	Right-handed 310
Helix 66	66	E	98	109	Right-handed alpha
Helix 67	67	E	116	118	Right-handed 310
Helix 68	68	E	128	148	Right-handed alpha
Helix 69	69	E	149	152	Right-handed 310
Helix 70	70	E	175	188	Right-handed alpha
Helix 71	71	E	198	209	Right-handed alpha
Helix 72	72	E	219	230	Right-handed alpha
Helix 73	73	E	251	256	Right-handed 310
Helix 74	74	E	298	302	Right-handed 310
Helix 75	75	E	303	326	Right-handed alpha
Helix 76	76	E	327	332	Right-handed alpha
Helix 77	77	E	333	339	Right-handed alpha
Helix 78	78	E	349	356	Right-handed alpha
Helix 79	79	E	362	368	Right-handed alpha
Helix 80	80	F	19	29	Right-handed alpha
Helix 81	81	F	40	44	Right-handed 310
Helix 82	82	F	46	53	Right-handed alpha
Helix 83	83	F	59	65	Right-handed alpha
Helix 84	84	F	76	83	Right-handed 310
Helix 85	85	F	94	97	Right-handed 310
Helix 86	86	F	98	109	Right-handed alpha
Helix 87	87	F	116	118	Right-handed 310
Helix 88	88	F	128	148	Right-handed alpha
Helix 89	89	F	149	152	Right-handed 310
Helix 90	90	F	175	188	Right-handed alpha
Helix 91	91	F	198	209	Right-handed alpha
Helix 92	92	F	219	230	Right-handed alpha
Helix 93	93	F	249	254	Right-handed alpha
Helix 94	94	F	298	302	Right-handed 310
Helix 95	95	F	303	326	Right-handed alpha
Helix 96	96	F	327	330	Right-handed 310
Helix 97	97	F	333	338	Right-handed alpha
Helix 98	98	F	349	357	Right-handed alpha
Helix 99	99	F	362	368	Right-handed alpha
Helix 100	100	G	19	29	Right-handed alpha
Helix 101	101	G	40	44	Right-handed 310
Helix 102	102	G	46	53	Right-handed alpha
Helix 103	103	G	59	64	Right-handed alpha
Helix 104	104	G	76	83	Right-handed 310
Helix 105	105	G	94	97	Right-handed 310
Helix 106	106	G	98	109	Right-handed alpha
Helix 107	107	G	116	118	Right-handed 310
Helix 108	108	G	128	147	Right-handed alpha
Helix 109	109	G	148	152	Right-handed 310
Helix 110	110	G	175	188	Right-handed alpha
Helix 111	111	G	198	209	Right-handed alpha
Helix 112	112	G	219	229	Right-handed alpha
Helix 113	113	G	249	254	Right-handed alpha
Helix 114	114	G	298	302	Right-handed 310
Helix 115	115	G	303	326	Right-handed alpha
Helix 116	116	G	327	332	Right-handed alpha
Helix 117	117	G	333	338	Right-handed alpha
Helix 118	118	G	349	357	Right-handed alpha
Helix 119	119	G	362	368	Right-handed alpha

There are 12 sheets in PDB entry 2EEZ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	56	58	first strand
Strand 2	A	32	36	parallel
Strand 3	A	2	5	parallel
Strand 4	A	68	70	parallel
Strand 5	A	88	91	parallel
Strand 6	A	111	114	parallel
Strand 7	A	340	343	anti-parallel
Strand 8	A	346	347	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	213	217	first strand
Strand 2	A	191	196	parallel
Strand 3	A	168	172	parallel
Strand 4	A	232	235	parallel
Strand 5	A	261	264	parallel
Strand 6	A	291	294	parallel
Strand 7	A	287	288	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	56	58	first strand
Strand 2	C	32	36	parallel
Strand 3	C	2	5	parallel
Strand 4	C	68	70	parallel
Strand 5	C	88	91	parallel
Strand 6	C	111	114	parallel
Strand 7	C	340	343	anti-parallel
Strand 8	C	346	347	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	214	217	first strand
Strand 2	C	191	196	parallel
Strand 3	C	168	172	parallel
Strand 4	C	232	235	parallel
Strand 5	C	261	264	parallel
Strand 6	C	291	294	parallel
Strand 7	C	287	288	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	56	58	first strand
Strand 2	D	32	36	parallel
Strand 3	D	2	5	parallel
Strand 4	D	68	70	parallel
Strand 5	D	88	91	parallel
Strand 6	D	111	114	parallel
Strand 7	D	340	343	anti-parallel
Strand 8	D	346	347	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	214	217	first strand
Strand 2	D	191	196	parallel
Strand 3	D	168	172	parallel
Strand 4	D	232	235	parallel
Strand 5	D	261	264	parallel
Strand 6	D	291	294	parallel
Strand 7	D	287	288	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	56	58	first strand
Strand 2	E	32	36	parallel
Strand 3	E	2	5	parallel
Strand 4	E	68	70	parallel
Strand 5	E	88	91	parallel
Strand 6	E	111	114	parallel
Strand 7	E	340	343	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	214	217	first strand
Strand 2	E	191	196	parallel
Strand 3	E	168	172	parallel
Strand 4	E	232	235	parallel
Strand 5	E	261	264	parallel
Strand 6	E	291	294	parallel
Strand 7	E	287	288	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	56	58	first strand
Strand 2	F	32	36	parallel
Strand 3	F	2	5	parallel
Strand 4	F	68	70	parallel
Strand 5	F	88	91	parallel
Strand 6	F	111	114	parallel
Strand 7	F	340	343	anti-parallel
Strand 8	F	346	347	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	214	217	first strand
Strand 2	F	191	196	parallel
Strand 3	F	168	172	parallel
Strand 4	F	232	235	parallel
Strand 5	F	261	264	parallel
Strand 6	F	291	294	parallel
Strand 7	F	287	288	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	56	58	first strand
Strand 2	G	32	36	parallel
Strand 3	G	2	5	parallel
Strand 4	G	68	70	parallel
Strand 5	G	88	91	parallel
Strand 6	G	111	114	parallel
Strand 7	G	340	343	anti-parallel
Strand 8	G	346	347	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	214	217	first strand
Strand 2	G	191	196	parallel
Strand 3	G	168	172	parallel
Strand 4	G	232	235	parallel
Strand 5	G	261	264	parallel
Strand 6	G	291	294	parallel
Strand 7	G	287	288	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 2EEZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
2EEZ