Analysis of interatomic Contacts of Structural Units in PDB entry:
2EF0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2EF0 entry

There is 1 chain in PDB entry 2EF0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 7LYS 301
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 2EF0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
19 37Right-handed alpha
Helix 2
2
A
56 70Right-handed alpha
Helix 3
3
A
80 82Right-handed 310
Helix 4
4
A
89 98Right-handed alpha
Helix 5
5
A
110 121Right-handed alpha
Helix 6
6
A
134 150Right-handed alpha
Helix 7
7
A
164 178Right-handed alpha
Helix 8
8
A
192 199Right-handed alpha
Helix 9
9
A
206 212Right-handed alpha
Helix 10
10
A
232 238Right-handed alpha
Helix 11
11
A
244 249Right-handed alpha
Helix 12
12
A
270 276Right-handed alpha
Helix 13
13
A
280 301Right-handed alpha
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There are 2 sheets in PDB entry 2EF0. Click on sheet of interest to get list of strands forming it: A, B,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
73 78first strand
Strand 2
A
47 52parallel
Strand 3
A
103 107parallel
Strand 4
A
125 129parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
202 204first strand
Strand 2
A
180 184parallel
Strand 3
A
156 160parallel
Strand 4
A
216 219parallel
Strand 5
A
256 259parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il