Analysis of interatomic Contacts of Structural Units in PDB entry:
2EF5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2EF5 entry

There are 6 chains in PDB entry 2EF5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 2PHE 291
B
 GLU 2PHE 291
D
 GLU 2PHE 291
E
 GLU 2PHE 291
F
 GLU 2PHE 291
G
 GLU 2PHE 291
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 96 helices in PDB entry 2EF5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
19 21Right-handed 310
Helix 2
2
A
22 30Right-handed alpha
Helix 3
3
A
31 39Right-handed alpha
Helix 4
4
A
66 83Right-handed alpha
Helix 5
5
A
96 98Right-handed 310
Helix 6
6
A
99 109Right-handed alpha
Helix 7
7
A
134 137Right-handed 310
Helix 8
8
A
138 144Right-handed alpha
Helix 9
9
A
148 156Right-handed alpha
Helix 10
10
A
159 161Right-handed 310
Helix 11
11
A
172 183Right-handed alpha
Helix 12
12
A
189 196Right-handed alpha
Helix 13
13
A
196 208Right-handed alpha
Helix 14
14
A
220 222Right-handed 310
Helix 15
15
A
239 254Right-handed alpha
Helix 16
16
A
272 286Right-handed alpha
Helix 17
17
B
19 21Right-handed 310
Helix 18
18
B
22 30Right-handed alpha
Helix 19
19
B
31 39Right-handed alpha
Helix 20
20
B
66 84Right-handed alpha
Helix 21
21
B
96 98Right-handed 310
Helix 22
22
B
99 109Right-handed alpha
Helix 23
23
B
134 137Right-handed 310
Helix 24
24
B
138 144Right-handed alpha
Helix 25
25
B
148 156Right-handed alpha
Helix 26
26
B
159 161Right-handed 310
Helix 27
27
B
172 183Right-handed alpha
Helix 28
28
B
189 196Right-handed alpha
Helix 29
29
B
196 208Right-handed alpha
Helix 30
30
B
220 222Right-handed 310
Helix 31
31
B
239 254Right-handed alpha
Helix 32
32
B
272 286Right-handed alpha
Helix 33
33
D
19 21Right-handed 310
Helix 34
34
D
22 30Right-handed alpha
Helix 35
35
D
31 39Right-handed alpha
Helix 36
36
D
66 83Right-handed alpha
Helix 37
37
D
96 98Right-handed 310
Helix 38
38
D
99 109Right-handed alpha
Helix 39
39
D
134 137Right-handed 310
Helix 40
40
D
138 144Right-handed alpha
Helix 41
41
D
148 156Right-handed alpha
Helix 42
42
D
159 161Right-handed 310
Helix 43
43
D
172 183Right-handed alpha
Helix 44
44
D
189 196Right-handed alpha
Helix 45
45
D
196 208Right-handed alpha
Helix 46
46
D
220 222Right-handed 310
Helix 47
47
D
239 254Right-handed alpha
Helix 48
48
D
272 286Right-handed alpha
Helix 49
49
E
19 21Right-handed 310
Helix 50
50
E
22 30Right-handed alpha
Helix 51
51
E
31 39Right-handed alpha
Helix 52
52
E
66 83Right-handed alpha
Helix 53
53
E
96 98Right-handed 310
Helix 54
54
E
99 109Right-handed alpha
Helix 55
55
E
134 137Right-handed 310
Helix 56
56
E
138 144Right-handed alpha
Helix 57
57
E
148 156Right-handed alpha
Helix 58
58
E
159 161Right-handed 310
Helix 59
59
E
172 183Right-handed alpha
Helix 60
60
E
189 196Right-handed alpha
Helix 61
61
E
196 208Right-handed alpha
Helix 62
62
E
220 222Right-handed 310
Helix 63
63
E
239 254Right-handed alpha
Helix 64
64
E
272 286Right-handed alpha
Helix 65
65
F
19 21Right-handed 310
Helix 66
66
F
22 30Right-handed alpha
Helix 67
67
F
31 39Right-handed alpha
Helix 68
68
F
66 83Right-handed alpha
Helix 69
69
F
96 98Right-handed 310
Helix 70
70
F
99 109Right-handed alpha
Helix 71
71
F
134 137Right-handed 310
Helix 72
72
F
138 144Right-handed alpha
Helix 73
73
F
148 156Right-handed alpha
Helix 74
74
F
159 161Right-handed 310
Helix 75
75
F
172 183Right-handed alpha
Helix 76
76
F
189 196Right-handed alpha
Helix 77
77
F
196 208Right-handed alpha
Helix 78
78
F
220 222Right-handed 310
Helix 79
79
F
239 254Right-handed alpha
Helix 80
80
F
272 286Right-handed alpha
Helix 81
81
G
19 21Right-handed 310
Helix 82
82
G
22 30Right-handed alpha
Helix 83
83
G
31 39Right-handed alpha
Helix 84
84
G
66 83Right-handed alpha
Helix 85
85
G
96 98Right-handed 310
Helix 86
86
G
99 109Right-handed alpha
Helix 87
87
G
134 137Right-handed 310
Helix 88
88
G
138 144Right-handed alpha
Helix 89
89
G
148 156Right-handed alpha
Helix 90
90
G
159 161Right-handed 310
Helix 91
91
G
172 183Right-handed alpha
Helix 92
92
G
189 196Right-handed alpha
Helix 93
93
G
196 208Right-handed alpha
Helix 94
94
G
220 222Right-handed 310
Helix 95
95
G
239 254Right-handed alpha
Helix 96
96
G
272 286Right-handed alpha
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There are 6 sheets in PDB entry 2EF5. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
42 48first strand
Strand 2
A
3 9parallel
Strand 3
A
88 94parallel
Strand 4
A
256 262parallel
Strand 5
A
213 218parallel
Strand 6
A
114 118parallel
Strand 7
A
163 168parallel
Strand 8
A
185 188parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
42 48first strand
Strand 2
B
3 9parallel
Strand 3
B
88 94parallel
Strand 4
B
256 262parallel
Strand 5
B
213 218parallel
Strand 6
B
114 118parallel
Strand 7
B
163 168parallel
Strand 8
B
185 188parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
42 48first strand
Strand 2
D
3 9parallel
Strand 3
D
88 94parallel
Strand 4
D
256 262parallel
Strand 5
D
213 218parallel
Strand 6
D
114 118parallel
Strand 7
D
163 168parallel
Strand 8
D
185 188parallel
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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
42 48first strand
Strand 2
E
3 9parallel
Strand 3
E
88 94parallel
Strand 4
E
256 262parallel
Strand 5
E
213 218parallel
Strand 6
E
114 118parallel
Strand 7
E
163 168parallel
Strand 8
E
185 188parallel
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There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
42 48first strand
Strand 2
F
3 9parallel
Strand 3
F
88 94parallel
Strand 4
F
256 262parallel
Strand 5
F
213 218parallel
Strand 6
F
114 118parallel
Strand 7
F
163 168parallel
Strand 8
F
185 188parallel
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There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
42 48first strand
Strand 2
G
3 9parallel
Strand 3
G
88 94parallel
Strand 4
G
256 262parallel
Strand 5
G
213 218parallel
Strand 6
G
114 118parallel
Strand 7
G
163 168parallel
Strand 8
G
185 188parallel
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