Analysis of interatomic Contacts of Structural Units in PDB entry:
2EG3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2EG3 entry

There are 4 chains in PDB entry 2EG3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1TYR 190
A
 HIS 192PRO 230
B
 PRO 4TYR 190
B
 HIS 192PRO 230
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 2EG3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 21Right-handed alpha
Helix 2
2
A
40 58Right-handed alpha
Helix 3
3
A
72 85Right-handed alpha
Helix 4
4
A
96 100Right-handed 310
Helix 5
5
A
124 130Right-handed alpha
Helix 6
6
A
139 144Right-handed alpha
Helix 7
7
A
165 171Right-handed 310
Helix 8
8
A
174 180Right-handed alpha
Helix 9
9
A
196 207Right-handed alpha
Helix 10
10
A
216 225Right-handed alpha
Helix 11
11
B
14 21Right-handed alpha
Helix 12
12
B
40 58Right-handed alpha
Helix 13
13
B
72 85Right-handed alpha
Helix 14
14
B
96 100Right-handed 310
Helix 15
15
B
118 122Right-handed 310
Helix 16
16
B
124 130Right-handed alpha
Helix 17
17
B
139 144Right-handed alpha
Helix 18
18
B
165 171Right-handed 310
Helix 19
19
B
174 180Right-handed alpha
Helix 20
20
B
196 207Right-handed alpha
Helix 21
21
B
216 224Right-handed alpha
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There are 4 sheets in PDB entry 2EG3. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 28first strand
Strand 2
A
8 11parallel
Strand 3
A
64 67parallel
Strand 4
A
89 92parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
122 123first strand
Strand 2
A
210 214parallel
Strand 3
A
186 190parallel
Strand 4
A
134 136parallel
Strand 5
A
162 163parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
27 28first strand
Strand 2
B
8 11parallel
Strand 3
B
64 67parallel
Strand 4
B
89 92parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
162 163first strand
Strand 2
B
134 136parallel
Strand 3
B
186 190parallel
Strand 4
B
210 213parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il