Analysis of interatomic Contacts of Structural Units in PDB entry:
2EG5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2EG5 entry

There are 4 chains in PDB entry 2EG5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 14PRO 367
C
 GLY 14PRO 367
E
 GLY 14PRO 367
G
 GLY 14PRO 367
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 2EG5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
24 46Right-handed alpha
Helix 2
2
A
65 83Right-handed alpha
Helix 3
3
A
106 113Right-handed alpha
Helix 4
4
A
113 126Right-handed alpha
Helix 5
5
A
190 215Right-handed alpha
Helix 6
6
A
237 252Right-handed alpha
Helix 7
7
A
271 283Right-handed alpha
Helix 8
8
A
308 330Right-handed alpha
Helix 9
9
A
333 349Right-handed alpha
Helix 10
10
A
350 352Right-handed 310
Helix 11
11
C
24 46Right-handed alpha
Helix 12
12
C
65 83Right-handed alpha
Helix 13
13
C
106 113Right-handed alpha
Helix 14
14
C
113 126Right-handed alpha
Helix 15
15
C
190 215Right-handed alpha
Helix 16
16
C
237 252Right-handed alpha
Helix 17
17
C
271 283Right-handed alpha
Helix 18
18
C
308 330Right-handed alpha
Helix 19
19
C
333 349Right-handed alpha
Helix 20
20
C
350 352Right-handed 310
Helix 21
21
E
24 46Right-handed alpha
Helix 22
22
E
65 83Right-handed alpha
Helix 23
23
E
106 113Right-handed alpha
Helix 24
24
E
113 126Right-handed alpha
Helix 25
25
E
190 215Right-handed alpha
Helix 26
26
E
237 252Right-handed alpha
Helix 27
27
E
271 283Right-handed alpha
Helix 28
28
E
308 330Right-handed alpha
Helix 29
29
E
333 349Right-handed alpha
Helix 30
30
E
350 352Right-handed 310
Helix 31
31
G
24 47Right-handed alpha
Helix 32
32
G
65 83Right-handed alpha
Helix 33
33
G
106 113Right-handed alpha
Helix 34
34
G
113 126Right-handed alpha
Helix 35
35
G
190 215Right-handed alpha
Helix 36
36
G
237 252Right-handed alpha
Helix 37
37
G
271 283Right-handed alpha
Helix 38
38
G
308 330Right-handed alpha
Helix 39
39
G
333 349Right-handed alpha
Helix 40
40
G
350 352Right-handed 310
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There are 4 sheets in PDB entry 2EG5. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
132 136first strand
Strand 2
A
94 100parallel
Strand 3
A
54 60parallel
Strand 4
A
151 157parallel
Strand 5
A
216 228parallel
Strand 6
A
355 365anti-parallel
Strand 7
A
285 296anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
132 136first strand
Strand 2
C
94 100parallel
Strand 3
C
54 60parallel
Strand 4
C
151 157parallel
Strand 5
C
216 228parallel
Strand 6
C
355 365anti-parallel
Strand 7
C
285 296anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
132 136first strand
Strand 2
E
94 100parallel
Strand 3
E
54 60parallel
Strand 4
E
151 157parallel
Strand 5
E
216 228parallel
Strand 6
E
355 365anti-parallel
Strand 7
E
285 296anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
132 136first strand
Strand 2
G
94 100parallel
Strand 3
G
54 60parallel
Strand 4
G
151 157parallel
Strand 5
G
216 228parallel
Strand 6
G
355 365anti-parallel
Strand 7
G
285 296anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il