Analysis of interatomic Contacts of Structural Units in PDB entry:
2EGG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2EGG entry

There are 2 chains in PDB entry 2EGG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 20ARG 297
B
 HIS 21ARG 296
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 2EGG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
37 49Right-handed alpha
Helix 2
2
A
64 76Right-handed alpha
Helix 3
3
A
90 94Right-handed 310
Helix 4
4
A
98 105Right-handed alpha
Helix 5
5
A
122 135Right-handed alpha
Helix 6
6
A
150 162Right-handed alpha
Helix 7
7
A
174 185Right-handed alpha
Helix 8
8
A
194 201Right-handed alpha
Helix 9
9
A
202 205Right-handed 310
Helix 10
10
A
246 255Right-handed alpha
Helix 11
11
A
262 279Right-handed alpha
Helix 12
12
A
283 297Right-handed alpha
Helix 13
13
B
37 49Right-handed alpha
Helix 14
14
B
64 76Right-handed alpha
Helix 15
15
B
90 94Right-handed 310
Helix 16
16
B
98 105Right-handed alpha
Helix 17
17
B
122 135Right-handed alpha
Helix 18
18
B
262 279Right-handed alpha
Helix 19
19
B
283 296Right-handed alpha
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There are 3 sheets in PDB entry 2EGG. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 59first strand
Strand 2
A
24 30parallel
Strand 3
A
79 82parallel
Strand 4
A
109 113anti-parallel
Strand 5
A
116 120anti-parallel
Strand 6
A
96 97parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
192 193first strand
Strand 2
A
167 171parallel
Strand 3
A
143 147parallel
Strand 4
A
207 210parallel
Strand 5
A
235 238parallel
Strand 6
A
258 260parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 59first strand
Strand 2
B
24 30parallel
Strand 3
B
79 82parallel
Strand 4
B
109 113anti-parallel
Strand 5
B
116 120anti-parallel
Strand 6
B
96 97parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il