Analysis of interatomic Contacts of Structural Units in PDB entry:
2EGU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2EGU entry

There is 1 chain in PDB entry 2EGU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 1ASP 308
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 2EGU. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
7 12Right-handed 310
Helix 2
2
A
37 39Right-handed 310
Helix 3
3
A
44 59Right-handed alpha
Helix 4
4
A
73 88Right-handed alpha
Helix 5
5
A
100 110Right-handed alpha
Helix 6
6
A
118 120Right-handed 310
Helix 7
7
A
121 138Right-handed alpha
Helix 8
8
A
157 167Right-handed alpha
Helix 9
9
A
180 194Right-handed alpha
Helix 10
10
A
244 260Right-handed alpha
Helix 11
11
A
264 282Right-handed alpha
Helix 12
12
A
294 299Right-handed 310
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There are 2 sheets in PDB entry 2EGU. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
17 19first strand
Strand 2
A
30 35anti-parallel
Strand 3
A
286 291parallel
Strand 4
A
172 176parallel
Strand 5
A
198 204parallel
Strand 6
A
239 243parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
67 71first strand
Strand 2
A
90 96parallel
Strand 3
A
113 117parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il